Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022224.1 Corchorus olitorius cultivar O-4 contig22257, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6610

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
395--427
3
11.0
3
93
0
57
33
3
0
63
1.10
391--423
15
2.2
15
100
0
66
33
6
0
60
1.21
503--550
15
3.4
15
68
26
50
43
4
20
31
1.71
503--555
27
2.0
27
100
0
106
41
5
18
33
1.74
673--723
24
2.1
24
85
7
68
50
0
7
41
1.31
1306--1349
18
2.4
18
88
7
63
40
0
6
52
1.28
3359--3422
29
2.2
29
80
0
74
37
7
20
34
1.81
5431--5456
13
2.0
13
100
0
52
76
7
0
15
0.99

Tables:   1

The End!