Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022232.1 Corchorus olitorius cultivar O-4 contig22265, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19914

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5496--5578
29
2.8
29
82
8
80
49
15
8
26
1.73
6502--6567
11
5.7
12
77
13
59
78
0
21
0
0.75
6517--6568
4
13.5
4
80
11
56
82
0
17
0
0.66
6508--6569
21
3.0
20
86
9
79
80
0
19
0
0.71
6502--6560
9
6.2
9
81
14
57
77
0
22
0
0.76
6517--6583
8
8.0
8
80
9
62
80
0
17
1
0.79
6505--6575
5
14.4
5
82
11
53
78
0
19
1
0.82
6520--6583
21
3.1
19
80
17
65
81
0
17
1
0.77
7963--8010
13
3.6
13
82
2
60
31
0
12
56
1.37
14593--14753
70
2.3
69
91
1
259
26
24
30
18
1.98

Tables:   1

The End!