Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022233.1 Corchorus olitorius cultivar O-4 contig22266, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  33061

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1461--1557
49
2.0
48
91
2
158
31
20
30
16
1.95
5692--5755
14
4.5
14
78
3
74
7
18
0
73
1.07
5692--5755
29
2.2
28
83
2
74
7
18
0
73
1.07
14474--14509
19
1.9
18
88
5
54
41
8
22
27
1.82
15787--15829
22
2.0
22
81
9
52
16
9
11
62
1.53
22390--22430
15
2.7
15
73
26
50
46
0
12
41
1.41
22711--22746
18
2.1
18
89
5
56
44
5
11
38
1.63
23588--23623
19
1.9
18
88
5
54
41
8
22
27
1.82
23576--23635
30
2.0
30
83
6
77
41
8
18
31
1.80
24904--24946
22
2.0
22
81
9
52
16
9
11
62
1.53
30569--30639
34
2.1
34
86
0
97
29
14
5
50
1.65
32933--33003
34
2.1
34
84
5
90
33
12
4
49
1.60

Tables:   1

The End!