Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022238.1 Corchorus olitorius cultivar O-4 contig22271, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26394

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6586--6615
3
10.0
3
100
0
60
66
0
0
33
0.92
13362--13396
2
17.5
2
88
11
54
51
0
2
45
1.16
15280--15451
47
3.7
47
92
0
265
40
11
11
36
1.78
15281--15495
94
2.3
93
83
6
260
40
12
11
35
1.79
18700--18761
25
2.5
25
81
5
72
30
12
24
32
1.93
22955--22979
8
3.1
8
100
0
50
36
0
0
64
0.94
24130--24318
22
8.5
22
76
6
148
38
10
15
35
1.83
24323--24886
22
26.1
22
68
15
157
35
9
17
37
1.82

Tables:   1

The End!