Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022249.1 Corchorus olitorius cultivar O-4 contig22282, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11235

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2767--2855
3
29.7
3
75
4
63
33
5
39
21
1.77
2767--2855
12
7.7
12
78
7
76
33
5
39
21
1.77
2767--2831
21
3.1
22
80
8
73
35
6
38
20
1.77
2806--2864
30
2.0
30
89
0
91
33
8
37
20
1.83
4050--4153
45
2.3
45
83
3
129
27
13
17
41
1.87
4426--4475
24
2.1
24
88
0
73
22
18
12
48
1.80
4734--4775
18
2.3
18
100
0
84
38
35
9
16
1.81
10661--10703
16
2.8
16
82
3
52
44
41
9
4
1.57

Tables:   1

The End!