Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022250.1 Corchorus olitorius cultivar O-4 contig22283, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7166

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
954--1007
15
3.4
16
80
14
58
42
38
12
5
1.67
4027--4089
19
3.4
18
72
14
65
1
36
46
15
1.56
4024--4128
37
2.8
37
92
0
165
4
40
41
13
1.65
4047--4107
18
3.3
18
69
13
52
4
42
40
11
1.62
4096--4147
24
2.2
24
96
0
95
3
38
44
13
1.62
5045--5084
21
1.9
21
85
10
55
17
30
5
47
1.69

Tables:   1

The End!