Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022260.1 Corchorus olitorius cultivar O-4 contig22293, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  60402

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
890--1026
33
4.1
34
96
2
242
20
14
10
54
1.70
5635--5697
31
2.1
31
90
3
101
49
3
19
28
1.63
13891--13933
22
1.9
23
95
4
79
25
23
13
37
1.92
18941--18983
22
1.9
23
95
4
79
25
23
13
37
1.92
22368--22452
32
2.7
32
84
0
98
14
12
34
38
1.84
22400--22457
16
3.6
16
70
9
55
10
15
36
37
1.82
22402--22476
32
2.3
32
84
6
89
12
14
37
36
1.83
22930--23001
31
2.3
31
75
17
78
61
8
4
26
1.43
31155--31198
21
2.1
21
87
4
63
61
11
2
25
1.41
45107--45150
21
2.1
21
86
0
61
34
18
20
27
1.96
50909--50947
18
2.1
19
90
4
62
43
15
12
28
1.83
51822--51851
15
2.1
15
93
6
53
66
6
13
13
1.43

Tables:   1

The End!