Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022261.1 Corchorus olitorius cultivar O-4 contig22294, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11349

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1373--1397
13
1.9
13
100
0
50
56
0
0
44
0.99
1582--1929
190
1.8
190
94
0
615
35
14
9
40
1.79
3621--3702
27
3.0
27
98
0
155
41
46
3
8
1.52
3650--3701
16
3.6
16
65
24
51
40
50
1
7
1.42
4128--4176
19
2.6
19
87
9
73
46
4
2
46
1.33
4491--4539
14
3.6
14
94
5
84
0
12
4
83
0.77
4491--4536
7
6.6
7
89
0
74
0
13
4
82
0.81
4602--4680
29
2.7
29
98
0
149
55
3
13
26
1.55
5236--5266
14
2.1
15
94
5
55
29
6
0
64
1.18
5757--5839
41
2.0
41
88
4
123
38
14
2
44
1.58
7008--7570
201
2.8
200
89
1
849
33
19
13
33
1.91
7643--7690
21
2.3
21
85
7
62
31
8
10
50
1.66

Tables:   1

The End!