Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022271.1 Corchorus olitorius cultivar O-4 contig22304, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15957

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9408--9536
69
1.9
69
85
3
179
23
13
15
47
1.81
12109--12259
52
2.9
52
92
2
241
35
14
16
33
1.89
13221--13272
18
2.9
17
86
13
70
0
11
9
78
0.95
13222--13266
11
4.6
10
76
23
51
0
11
8
80
0.92
15509--15585
28
2.8
28
86
2
111
20
14
23
41
1.89

Tables:   1

The End!