Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022283.1 Corchorus olitorius cultivar O-4 contig22316, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12000

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1142--1172
16
2.0
16
93
6
55
12
35
0
51
1.40
2929--3309
40
9.6
40
89
1
559
20
28
17
32
1.96
2926--3309
121
3.2
120
90
1
583
20
28
17
32
1.96
4149--4190
21
2.0
21
85
0
57
16
23
33
26
1.96
11763--11826
24
2.6
23
80
11
65
70
3
17
9
1.27

Tables:   1

The End!