Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022291.1 Corchorus olitorius cultivar O-4 contig22324, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24941

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5137--5170
17
2.1
16
88
5
50
76
0
17
5
0.98
11785--11821
10
3.6
10
85
7
56
75
0
18
5
0.99
13817--13862
19
2.5
18
75
6
56
50
2
0
47
1.13
14061--14108
24
2.0
24
95
0
87
31
0
35
33
1.58
22721--22753
12
2.9
12
86
13
52
33
0
6
60
1.21
22932--22965
16
2.2
15
89
5
50
47
2
5
44
1.42
23148--23190
2
22.0
2
86
13
63
51
0
2
46
1.13
23148--23190
15
3.0
15
90
6
63
51
0
2
46
1.13
23148--23185
17
2.2
17
100
0
76
52
0
0
47
1.00
23812--23849
15
2.4
17
87
12
55
36
39
15
7
1.77
23991--24025
2
17.5
2
100
0
70
51
0
0
48
1.00
24499--24751
132
1.9
133
90
0
409
23
24
12
39
1.90

Tables:   1

The End!