Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022307.1 Corchorus olitorius cultivar O-4 contig22340, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  30278

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
138--217
31
2.7
30
84
7
92
40
12
16
31
1.85
8183--8219
19
2.0
19
89
5
58
64
0
0
35
0.94
15777--15829
27
2.0
27
96
0
97
9
28
7
54
1.59
15974--16003
15
1.9
16
93
6
53
23
0
23
53
1.46
16363--16411
23
2.2
23
85
3
64
30
4
4
61
1.33
16992--17017
13
2.0
13
100
0
52
15
7
38
38
1.76
22972--23030
22
2.7
22
97
0
109
38
33
11
15
1.84
26205--26504
148
2.0
148
97
0
564
32
16
20
30
1.95
29980--30019
20
2.0
20
90
0
62
37
10
40
12
1.77

Tables:   1

The End!