Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022331.1 Corchorus olitorius cultivar O-4 contig22364, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23214

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10360--10390
2
15.5
2
100
0
62
51
0
0
48
1.00
12769--12821
27
2.0
27
84
0
70
18
15
16
49
1.80
14308--14376
21
3.4
21
80
11
74
4
18
0
76
0.94
14334--14378
20
2.3
19
84
3
63
2
20
0
77
0.87
17041--17082
23
1.9
21
85
9
57
59
7
14
19
1.57
18848--18877
15
2.0
15
93
0
51
43
20
13
23
1.86
22320--22420
33
3.1
32
83
12
116
44
23
5
25
1.76
22338--22486
33
4.5
33
76
6
124
42
22
8
26
1.81
22375--22498
66
1.9
66
84
3
169
41
22
9
25
1.84

Tables:   1

The End!