Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022333.1 Corchorus olitorius cultivar O-4 contig22366, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28633

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
422--564
33
4.3
32
79
5
117
41
20
9
27
1.83
470--596
66
1.9
66
85
3
175
41
23
9
25
1.84
5418--5540
55
2.2
55
100
0
246
52
8
15
23
1.69
13244--13371
63
2.0
65
95
3
233
32
10
16
39
1.83
21512--21890
120
3.2
118
88
6
550
29
18
13
38
1.90
21463--21890
120
3.6
116
86
6
536
29
18
14
37
1.91
25400--25425
11
2.4
11
100
0
52
92
0
0
7
0.39

Tables:   1

The End!