Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022335.1 Corchorus olitorius cultivar O-4 contig22368, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  31667

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1451--1486
19
1.9
18
88
5
54
27
22
8
41
1.82
2279--2320
15
2.8
16
86
13
54
57
19
9
14
1.64
5483--5518
19
1.9
18
88
5
54
41
2
22
33
1.68
6912--6959
17
2.8
17
87
6
62
33
20
22
22
1.97
11071--11106
18
2.0
18
88
0
54
47
5
11
36
1.63
13758--13804
7
6.9
7
83
13
62
68
0
2
29
1.02
20528--20561
11
3.1
11
95
0
59
38
5
44
11
1.65
24076--24189
56
2.0
56
96
0
210
35
21
1
41
1.64
29783--29916
21
6.4
21
94
1
200
26
26
17
29
1.97

Tables:   1

The End!