Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022337.1 Corchorus olitorius cultivar O-4 contig22370, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18244

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1814--1947
21
6.4
21
94
1
193
26
26
18
29
1.98
7220--7353
21
6.4
21
95
1
193
28
18
26
26
1.98
11913--12068
50
3.1
50
85
6
206
30
17
13
38
1.88
13028--13196
69
2.4
69
93
0
284
26
29
15
27
1.96
13139--13294
52
3.0
52
93
0
276
27
29
16
26
1.97
13243--13385
69
2.1
69
93
0
241
27
30
16
25
1.96
13270--13584
173
1.8
173
83
2
418
27
26
15
30
1.96
16413--18145
154
11.3
154
91
3
2744
41
20
17
20
1.91
16413--18145
461
3.8
461
92
3
2776
41
20
17
20
1.91
18084--18205
64
1.9
63
90
5
192
43
15
20
20
1.88

Tables:   1

The End!