Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022343.1 Corchorus olitorius cultivar O-4 contig22376, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11126

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8830--9132
35
8.7
35
91
0
464
27
21
20
31
1.98
8830--9132
139
2.2
140
95
0
545
27
21
20
31
1.98
9717--9856
50
2.9
49
80
12
173
34
15
18
32
1.92
10456--10521
5
12.6
5
80
16
64
16
1
16
65
1.36
10455--10535
23
3.7
23
78
20
100
16
1
14
67
1.29
10461--10516
18
3.0
19
85
14
73
16
1
16
66
1.35
10455--10525
24
3.1
22
89
6
97
15
1
15
67
1.30
10463--10544
43
2.0
40
88
9
121
15
1
14
68
1.28
10467--10542
18
4.1
18
78
6
73
14
1
13
71
1.22

Tables:   1

The End!