Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022345.1 Corchorus olitorius cultivar O-4 contig22378, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19395

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3522--3571
21
2.4
21
89
0
73
16
48
24
12
1.79
3928--3957
15
2.1
14
93
6
51
13
16
6
63
1.50
6823--6862
15
2.6
16
88
8
64
15
7
12
65
1.47
9285--9378
41
2.3
42
81
7
104
24
14
14
45
1.83
10542--10585
22
2.0
23
86
4
63
77
4
13
4
1.08
15888--15978
33
2.7
34
82
1
112
32
18
1
47
1.56
16003--16056
17
3.2
17
77
15
67
18
20
0
61
1.35
16033--16093
26
2.3
27
72
8
63
18
18
1
62
1.41

Tables:   1

The End!