Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022351.1 Corchorus olitorius cultivar O-4 contig22384, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  41545

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
18200--18529
43
7.8
43
84
6
442
20
10
26
43
1.83
18198--18529
84
3.9
84
94
2
551
21
9
25
42
1.84
31036--31363
41
7.8
43
84
7
417
21
10
25
42
1.85
31034--31363
84
3.9
84
90
2
488
21
10
25
42
1.85
38059--38103
23
2.0
23
82
8
56
48
11
8
31
1.69
39555--39602
17
2.6
20
75
21
59
18
8
16
56
1.65
40184--40235
27
2.0
25
85
10
70
30
13
7
48
1.71
40209--40276
35
2.0
35
85
8
95
29
13
5
51
1.64

Tables:   1

The End!