Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022364.1 Corchorus olitorius cultivar O-4 contig22397, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19706

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5878--5903
13
2.0
13
100
0
52
30
15
0
53
1.42
6022--6047
13
2.0
13
100
0
52
30
15
0
53
1.42
6049--6184
69
2.0
67
92
2
227
24
18
7
50
1.72
6284--6434
75
2.0
75
94
1
268
29
16
11
43
1.83
6410--6482
35
2.1
35
84
7
94
23
10
13
52
1.72
6623--6674
9
5.4
10
80
15
65
0
0
11
88
0.52
6623--6675
1
53.0
1
76
0
52
0
0
11
88
0.51
6622--6664
23
1.9
22
90
4
68
0
0
13
86
0.58
6622--6675
11
5.0
11
84
13
76
0
0
12
87
0.56
16647--16676
15
1.9
16
93
6
53
20
6
6
66
1.38

Tables:   1

The End!