Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022371.1 Corchorus olitorius cultivar O-4 contig22404, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17650

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1023--1173
76
2.0
76
81
2
178
17
31
25
25
1.97
2215--2632
114
3.7
113
89
3
617
31
16
21
30
1.96
2215--2632
229
1.8
226
89
3
651
31
16
21
30
1.96
2751--2779
14
2.1
14
100
0
58
0
48
0
51
1.00
5338--5449
32
3.5
30
80
11
125
29
19
25
25
1.99
5483--5786
152
2.0
152
96
0
563
25
20
20
33
1.97
9330--9360
11
2.7
12
90
10
55
35
6
6
51
1.53
10264--10317
27
2.0
28
82
10
67
7
35
1
55
1.39
11914--11954
19
2.2
19
100
0
82
39
9
14
36
1.79

Tables:   1

The End!