Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022373.1 Corchorus olitorius cultivar O-4 contig22406, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14688

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3293--3358
15
4.7
15
70
21
52
48
18
0
33
1.48
3729--3765
2
19.5
2
86
10
51
45
0
0
54
1.00
3852--3973
43
2.9
43
81
4
149
39
6
1
52
1.37
3816--3921
14
7.4
14
70
16
74
37
7
0
53
1.36
5627--5701
34
2.2
35
81
13
93
49
2
2
45
1.30
5649--5724
36
2.1
36
90
4
118
46
1
3
48
1.29
5764--5878
32
3.6
32
85
0
149
27
18
24
29
1.98
8154--8194
19
2.2
19
86
8
57
29
4
0
65
1.13
9299--9341
18
2.5
17
82
14
52
46
0
20
32
1.51
10054--10080
2
13.5
2
100
0
54
48
0
0
51
1.00

Tables:   1

The End!