Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022387.1 Corchorus olitorius cultivar O-4 contig22420, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13743

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
977--1029
28
1.9
27
85
11
72
60
11
7
20
1.55
3536--3629
50
1.9
48
89
4
143
44
10
8
36
1.70
6560--6589
15
1.9
16
93
6
53
40
0
3
56
1.16
6560--6597
15
2.4
16
82
13
51
42
0
5
52
1.24
8330--8386
25
2.4
24
85
5
71
29
7
3
59
1.40
9070--9230
78
2.0
80
91
2
263
33
13
1
51
1.49
11108--11140
17
1.9
17
100
0
66
45
6
12
36
1.66
13452--13545
45
2.2
44
83
11
115
37
18
5
39
1.73

Tables:   1

The End!