Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022402.1 Corchorus olitorius cultivar O-4 contig22435, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17152

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--172
7
25.3
7
91
8
293
41
44
0
14
1.45
1--172
41
4.2
41
94
5
289
41
44
0
14
1.45
8157--8218
28
2.2
28
88
8
90
29
0
0
70
0.87
8157--8222
29
2.3
30
87
12
102
31
0
0
68
0.90
8167--8221
17
3.1
17
78
14
65
29
0
0
70
0.87
8236--8298
31
2.0
31
87
6
92
36
14
15
33
1.88
16056--16112
25
2.3
25
93
0
105
54
0
10
35
1.35
16070--16109
14
3.1
14
72
20
50
52
0
12
35
1.39
16627--16661
18
1.9
18
88
0
52
60
0
5
34
1.21

Tables:   1

The End!