Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022403.1 Corchorus olitorius cultivar O-4 contig22436, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  45201

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
982--1096
58
2.0
58
86
3
160
34
14
18
32
1.91
1491--2187
281
2.5
280
97
0
1304
33
15
11
39
1.83
3207--3624
205
2.0
204
90
5
655
44
8
10
36
1.70
3739--3805
21
3.2
21
66
16
57
34
1
11
52
1.48
4034--4069
6
5.8
6
96
3
63
50
0
13
36
1.43
19257--19282
6
4.3
6
100
0
52
61
19
0
19
1.35
20572--20638
28
2.5
27
86
11
86
25
20
10
43
1.84
37818--37842
5
5.0
5
100
0
50
40
20
0
40
1.52
38638--38946
120
2.6
120
94
0
537
42
17
29
10
1.83

Tables:   1

The End!