Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022404.1 Corchorus olitorius cultivar O-4 contig22437, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24778

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6261--6295
5
6.6
5
93
6
52
0
17
0
82
0.66
6256--6296
6
7.2
6
91
8
52
0
19
0
80
0.71
9869--9894
12
2.2
12
100
0
52
7
15
38
38
1.76
19405--19483
31
2.5
31
87
0
122
32
15
16
35
1.90
21202--21241
19
2.1
19
85
0
53
30
10
25
35
1.88
21355--21379
13
1.9
13
100
0
50
16
0
44
40
1.47
22612--22695
34
2.5
34
100
0
168
2
27
7
63
1.33
22655--22710
22
2.4
25
82
17
91
3
25
10
60
1.45
22606--22695
3
29.3
3
80
12
94
2
27
6
63
1.31

Tables:   1

The End!