Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022405.1 Corchorus olitorius cultivar O-4 contig22438, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18266

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4038--4090
7
7.6
7
87
6
56
58
0
0
41
0.98
4038--4067
12
2.6
11
90
10
51
53
0
0
46
1.00
4095--4123
7
4.3
7
91
8
51
27
0
44
27
1.54
4875--4942
31
2.2
32
84
7
86
32
32
22
13
1.92
5371--5579
105
2.0
102
87
6
296
51
1
11
34
1.50
9329--9370
17
2.5
17
80
7
50
16
9
16
57
1.65
11469--11546
29
2.7
29
82
9
79
24
8
16
50
1.74
13219--13312
45
2.2
42
90
7
145
36
5
20
38
1.75
14048--14110
3
21.0
3
100
0
126
33
0
0
66
0.92

Tables:   1

The End!