Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022409.1 Corchorus olitorius cultivar O-4 contig22442, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  48117

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7495--7579
35
2.4
35
86
4
116
50
27
7
15
1.69
7573--7654
41
2.0
41
92
0
137
47
19
23
9
1.79
13280--13325
7
6.6
7
100
0
92
15
0
56
28
1.39
14296--14326
14
2.2
14
100
0
62
58
12
16
12
1.64
14760--14824
30
2.2
30
94
0
112
13
29
29
27
1.95
14760--14840
30
2.7
30
88
0
81
16
29
27
27
1.97
15212--15338
33
3.8
33
75
2
121
27
45
10
16
1.79
21948--21980
2
16.5
2
100
0
66
48
0
0
51
1.00

Tables:   1

The End!