Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: AWUE01022434.1 Corchorus olitorius cultivar O-4 contig22467, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 18205
ACGTcount: A:0.32, C:0.16, G:0.17, T:0.35
Found at i:1920 original size:31 final size:29
Alignment explanation
Indices: 1885--1957 Score: 92
Period size: 29 Copynumber: 2.4 Consensus size: 29
1875 ATACCGTACA
1885 GGTCCCTCTACTTTCAAAAAAAGATCAATTT
1 GGTCCCTCTACTTT-AAAAAAAG-TCAATTT
* * **
1916 GGTCCGTCTACTATAAAAACTGTCAATTT
1 GGTCCCTCTACTTTAAAAAAAGTCAATTT
1945 GGTCCCTCTACTT
1 GGTCCCTCTACTT
1958 ACAATTTGGT
Statistics
Matches: 36, Mismatches: 6, Indels: 2
0.82 0.14 0.05
Matches are distributed among these distances:
29 18 0.50
30 6 0.17
31 12 0.33
ACGTcount: A:0.29, C:0.25, G:0.12, T:0.34
Consensus pattern (29 bp):
GGTCCCTCTACTTTAAAAAAAGTCAATTT
Found at i:2300 original size:28 final size:31
Alignment explanation
Indices: 2257--2329 Score: 98
Period size: 29 Copynumber: 2.5 Consensus size: 31
2247 CACCAAATTA
* *
2257 TAAGTAGAGGGACCAAATTGA-CAGTTTTTG
1 TAAGTAGAGGGACCAAATCGATCACTTTTTG
*
2287 T-AGTAG-GGGACCAAATCGATCCCTTTTTG
1 TAAGTAGAGGGACCAAATCGATCACTTTTTG
2316 TAAGTAGAGGGACC
1 TAAGTAGAGGGACC
2330 TGTACGGTAT
Statistics
Matches: 37, Mismatches: 3, Indels: 5
0.82 0.07 0.11
Matches are distributed among these distances:
28 12 0.32
29 13 0.35
30 6 0.16
31 6 0.16
ACGTcount: A:0.30, C:0.15, G:0.27, T:0.27
Consensus pattern (31 bp):
TAAGTAGAGGGACCAAATCGATCACTTTTTG
Found at i:3091 original size:59 final size:58
Alignment explanation
Indices: 3001--3239 Score: 219
Period size: 59 Copynumber: 4.0 Consensus size: 58
2991 TTCATCTGAC
* *
3001 AGTTTATGTTGAACTTAGTATTTGGGTTAGGGTATGCTTAATTATGTCTTGATGATGGA
1 AGTTTATGTTGAACTTAG-AATTGGATTAGGGTATGCTTAATTATGTCTTGATGATGGA
* * * * * *
3060 ATTTTATGTTAAAGTTAGAATTCGGATTAGGGTACGCTTAGTTTTGTCTTGATGATGGA
1 AGTTTATGTTGAACTTAGAATT-GGATTAGGGTATGCTTAATTATGTCTTGATGATGGA
* * * * **
3119 AGTTTATGGTGAACTTAGTAATTGGATTAGGGTTTGCTTAGGTATATATCTAAATGATTGG-
1 AGTTTATGTTGAACTTAG-AATTGGATTAGGGTATGCTTA-AT-TATGTCTTGATGA-TGGA
* * * * * * *
3180 AGTTTATGGTGAACTTAGTATTTAGACTAGGATATGCTTAACTATGTCTTAATGATGGA
1 AGTTTATGTTGAACTTAG-AATTGGATTAGGGTATGCTTAATTATGTCTTGATGATGGA
3239 A
1 A
3240 ATTTTGATTC
Statistics
Matches: 147, Mismatches: 27, Indels: 12
0.79 0.15 0.06
Matches are distributed among these distances:
58 6 0.04
59 88 0.60
60 6 0.04
61 44 0.30
62 3 0.02
ACGTcount: A:0.27, C:0.06, G:0.25, T:0.41
Consensus pattern (58 bp):
AGTTTATGTTGAACTTAGAATTGGATTAGGGTATGCTTAATTATGTCTTGATGATGGA
Found at i:3716 original size:72 final size:72
Alignment explanation
Indices: 3599--3813 Score: 385
Period size: 72 Copynumber: 3.0 Consensus size: 72
3589 AACTTGAAAT
* *
3599 GTTTCAGGACTGCCTCTTCTTCGCAGCGAGGAAAAGATGCAACATCAACCAGTAGTTTGACGGTA
1 GTTTCAGGACTGTCTCTTCTTCGCAGAGAGGAAAAGATGCAACATCAACCAGTAGTTTGACGGTA
3664 AATTCAA
66 AATTCAA
* * *
3671 GTTTCAGGACTGTCTCTTCTTCACAGAGAGGAAAAGATGCAACATCAACGAGTAGTTTGACAGTA
1 GTTTCAGGACTGTCTCTTCTTCGCAGAGAGGAAAAGATGCAACATCAACCAGTAGTTTGACGGTA
3736 AATTCAA
66 AATTCAA
3743 GTTTCAGGACTGTCTCTTCTTCGCAGAGAGGAAAAGATGCAACATCAACCAGTAGTTTGACGGTA
1 GTTTCAGGACTGTCTCTTCTTCGCAGAGAGGAAAAGATGCAACATCAACCAGTAGTTTGACGGTA
3808 AATTCA
66 AATTCA
3814 TTTTCTATCT
Statistics
Matches: 135, Mismatches: 8, Indels: 0
0.94 0.06 0.00
Matches are distributed among these distances:
72 135 1.00
ACGTcount: A:0.32, C:0.20, G:0.22, T:0.26
Consensus pattern (72 bp):
GTTTCAGGACTGTCTCTTCTTCGCAGAGAGGAAAAGATGCAACATCAACCAGTAGTTTGACGGTA
AATTCAA
Found at i:5973 original size:31 final size:31
Alignment explanation
Indices: 5938--5999 Score: 106
Period size: 31 Copynumber: 2.0 Consensus size: 31
5928 GACATGCCAT
*
5938 GTGTACAAAAAAGCGACATGTGGCACACCAC
1 GTGTACAAAAAAGCAACATGTGGCACACCAC
*
5969 GTGTACTAAAAAGCAACATGTGGCACACCAC
1 GTGTACAAAAAAGCAACATGTGGCACACCAC
6000 ATATACCAAA
Statistics
Matches: 29, Mismatches: 2, Indels: 0
0.94 0.06 0.00
Matches are distributed among these distances:
31 29 1.00
ACGTcount: A:0.39, C:0.26, G:0.21, T:0.15
Consensus pattern (31 bp):
GTGTACAAAAAAGCAACATGTGGCACACCAC
Found at i:6513 original size:13 final size:13
Alignment explanation
Indices: 6495--6519 Score: 50
Period size: 13 Copynumber: 1.9 Consensus size: 13
6485 TAGAGGGATT
6495 AAAAAAAAAAAGA
1 AAAAAAAAAAAGA
6508 AAAAAAAAAAAG
1 AAAAAAAAAAAG
6520 CGAGAACTGA
Statistics
Matches: 12, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 12 1.00
ACGTcount: A:0.92, C:0.00, G:0.08, T:0.00
Consensus pattern (13 bp):
AAAAAAAAAAAGA
Found at i:8721 original size:18 final size:19
Alignment explanation
Indices: 8698--8742 Score: 67
Period size: 18 Copynumber: 2.5 Consensus size: 19
8688 GGTGGGGGCT
8698 GCGGTGGTGTGC-GCGGCG
1 GCGGTGGTGTGCTGCGGCG
8716 GCGGT-GTGTGCTGCGGCG
1 GCGGTGGTGTGCTGCGGCG
*
8734 GCGCTGGTG
1 GCGGTGGTG
8743 GTTCGTCACA
Statistics
Matches: 24, Mismatches: 1, Indels: 3
0.86 0.04 0.11
Matches are distributed among these distances:
17 6 0.25
18 15 0.62
19 3 0.12
ACGTcount: A:0.00, C:0.22, G:0.58, T:0.20
Consensus pattern (19 bp):
GCGGTGGTGTGCTGCGGCG
Found at i:8731 original size:15 final size:15
Alignment explanation
Indices: 8695--8734 Score: 53
Period size: 15 Copynumber: 2.7 Consensus size: 15
8685 AGCGGTGGGG
*
8695 GCTGCGGTGGTGTGC
1 GCTGCGGCGGTGTGC
* *
8710 GCGGCGGCGGTGTGT
1 GCTGCGGCGGTGTGC
8725 GCTGCGGCGG
1 GCTGCGGCGG
8735 CGCTGGTGGT
Statistics
Matches: 21, Mismatches: 4, Indels: 0
0.84 0.16 0.00
Matches are distributed among these distances:
15 21 1.00
ACGTcount: A:0.00, C:0.23, G:0.57, T:0.20
Consensus pattern (15 bp):
GCTGCGGCGGTGTGC
Found at i:10731 original size:1 final size:1
Alignment explanation
Indices: 10725--10765 Score: 73
Period size: 1 Copynumber: 41.0 Consensus size: 1
10715 CTATCTTGGA
*
10725 TTTTTTTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
1 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
10766 CCTGAAATTT
Statistics
Matches: 38, Mismatches: 2, Indels: 0
0.95 0.05 0.00
Matches are distributed among these distances:
1 38 1.00
ACGTcount: A:0.02, C:0.00, G:0.00, T:0.98
Consensus pattern (1 bp):
T
Found at i:16111 original size:548 final size:548
Alignment explanation
Indices: 15078--16546 Score: 2719
Period size: 548 Copynumber: 2.7 Consensus size: 548
15068 TTTTGGCTAA
* *
15078 AAATTGAGAAAATAACTTTCAAGTCAATTTTTTCAAGATTCTAGCCGAAATAGCGGTTTTTGACT
1 AAATTGAGAAAATAACTTTCAAGTCAATTTTTTCAAGATTCTAGCCGAAATCGCGGTTTTTGGCT
*
15143 AAAAATGCGTTTCGGGG---CGGCTTAATTTTGTAAGATTTTTGGCGCCGAGACTCCTTGAAATA
66 AAAAATGCGTTTCGGGGCACCGGCTTAATTTTGCAAGATTTTTGGCGCCGAGACTCCTTGAAATA
15205 TCTATATTCATCTAATCAAATCTCAGCTACATTGGATTTAAGGATTTATTTTTATGAGCATCTGA
131 TCTATATTCATCTAATCAAATCTCAGCTACATTGGATTTAAGGATTTATTTTTATGAGCATCTGA
15270 ATCTTTTTTCGATTTAATTAGAAATTAATTCAGAAAAATATAAAAAACGATATTAAAAGCGTGAA
196 ATCTTTTTTCGATTTAATTAGAAATTAATTCAGAAAAATATAAAAAACGATATTAAAAGCGTGAA
15335 GAGTCCTCCAATACTTTTGGCGTTAAATTATATATATTTTATGAGTATTTTAGCCAAAAATTGAT
261 GAGTCCTCCAATACTTTTGGCGTTAAATTATATATATTTTATGAGTATTTTAGCCAAAAATTGAT
15400 GGAAAATTTTTTCAGGTCATTTTTTACAAAATCTTAGCCAAAATCGTGTACTATCCATCACGATT
326 GGAAAATTTTTTCAGGTCATTTTTTACAAAATCTTAGCCAAAATCGTGTACTATCCATCACGATT
* * * *
15465 TTTAGCTAAAAACGCGTTTTGGGACCTTGGCTTAGTTTTGCATTATTTTTGGCACCGAGACTCCT
391 TCTAGCTAAAAACGCGTTTTGGGACCCTAGCTTAGTTTTGCATGATTTTTGGCACCGAGACTCCT
15530 TGAAATATCTATATTCATCAAATCAAATCTCAGCCACATTGAATTTAAGGATTTGTTTTTACGAG
456 TGAAATATCTATATTCATCAAATCAAATCTCAGCCACATTGAATTTAAGGATTTGTTTTTACGAG
15595 CATCTGAATCATGTTTCGATTTAATTAG
521 CATCTGAATCATGTTTCGATTTAATTAG
15623 AAATTGAGAAAATAACTTTCAAGTCAATTTTTTCAAGATTCTAGCCGAAATCGCGGTTTTTGGCT
1 AAATTGAGAAAATAACTTTCAAGTCAATTTTTTCAAGATTCTAGCCGAAATCGCGGTTTTTGGCT
15688 AAAAATGCGTTTCGGGGCACCGGCTTAATTTTGCAAGATTTTTGGCGCCGAGACTCCTTGAAATA
66 AAAAATGCGTTTCGGGGCACCGGCTTAATTTTGCAAGATTTTTGGCGCCGAGACTCCTTGAAATA
* *
15753 TCTATATTCATCTAATCAAATCACAGCTACATTGGATTTAAGGATTTATTTTTATGATCATCTGA
131 TCTATATTCATCTAATCAAATCTCAGCTACATTGGATTTAAGGATTTATTTTTATGAGCATCTGA
*
15818 ATCTTTTTTCGATTTAATTAGAAATTAATTCAGAAAAATATAAAAATCGATATTAAAAGCGTGAA
196 ATCTTTTTTCGATTTAATTAGAAATTAATTCAGAAAAATATAAAAAACGATATTAAAAGCGTGAA
*
15883 GAGTCCTCCAATACTTTTGACGTTAAATTATATATATTTTATGAGTATTTTAGCCAAAAATTGAT
261 GAGTCCTCCAATACTTTTGGCGTTAAATTATATATATTTTATGAGTATTTTAGCCAAAAATTGAT
* * *
15948 GGAAAAATTTTTCAGGTCATTTTTTGCAAAATTTTAGCCAAAATCGTGTACTATCCATCACGATT
326 GGAAAATTTTTTCAGGTCATTTTTTACAAAATCTTAGCCAAAATCGTGTACTATCCATCACGATT
*
16013 TCTAGCTAAAAACGCGTTTTGGGACCCTAGCTTAGTTTTGTATGATTTTTGGCACCGAGACTCCT
391 TCTAGCTAAAAACGCGTTTTGGGACCCTAGCTTAGTTTTGCATGATTTTTGGCACCGAGACTCCT
16078 TGAAATATCTATATTCATCAAATCAAATCTCAGCCACATTGAATTTAAGGATTTGTTTTTACGAG
456 TGAAATATCTATATTCATCAAATCAAATCTCAGCCACATTGAATTTAAGGATTTGTTTTTACGAG
16143 CATCTGAATCATGTTTCGATTTAATTAG
521 CATCTGAATCATGTTTCGATTTAATTAG
*
16171 AAATTGAGAAAATAACTGTCAAGTCAATTTTTTCAAGATTCTAGCCGAAATCGCGGTTTTTGGCT
1 AAATTGAGAAAATAACTTTCAAGTCAATTTTTTCAAGATTCTAGCCGAAATCGCGGTTTTTGGCT
16236 AAAAATGCGTTTCGGGGCACCGGCTTAATTTTGCAAGATTTTTGGCGCCGAGACTCCTTGAAATA
66 AAAAATGCGTTTCGGGGCACCGGCTTAATTTTGCAAGATTTTTGGCGCCGAGACTCCTTGAAATA
*
16301 TCTATATTCATCTAATCAAATTTCAGCTACATTGGATTTAAGGATTTATTTTTATGAGCATCTGA
131 TCTATATTCATCTAATCAAATCTCAGCTACATTGGATTTAAGGATTTATTTTTATGAGCATCTGA
*
16366 ATCTTTTTTCGATTTAATTAGAAATTAATTCAGAAAAAGATAAAAAACGATATTAAAAGCGTGAA
196 ATCTTTTTTCGATTTAATTAGAAATTAATTCAGAAAAATATAAAAAACGATATTAAAAGCGTGAA
** * *
16431 GAGTCCTCCAATTTTTTTGGCGTTAAATTATATATATTTCATGAGTATTTTAGCCAACAATTGAT
261 GAGTCCTCCAATACTTTTGGCGTTAAATTATATATATTTTATGAGTATTTTAGCCAAAAATTGAT
16496 GGAAAATTTTTTCAGGTCATTTTTTACAAAATCTTAGCCAAAATCGTGTAC
326 GGAAAATTTTTTCAGGTCATTTTTTACAAAATCTTAGCCAAAATCGTGTAC
16547 CAAAATTATT
Statistics
Matches: 892, Mismatches: 29, Indels: 3
0.97 0.03 0.00
Matches are distributed among these distances:
545 80 0.09
548 812 0.91
ACGTcount: A:0.33, C:0.15, G:0.16, T:0.37
Consensus pattern (548 bp):
AAATTGAGAAAATAACTTTCAAGTCAATTTTTTCAAGATTCTAGCCGAAATCGCGGTTTTTGGCT
AAAAATGCGTTTCGGGGCACCGGCTTAATTTTGCAAGATTTTTGGCGCCGAGACTCCTTGAAATA
TCTATATTCATCTAATCAAATCTCAGCTACATTGGATTTAAGGATTTATTTTTATGAGCATCTGA
ATCTTTTTTCGATTTAATTAGAAATTAATTCAGAAAAATATAAAAAACGATATTAAAAGCGTGAA
GAGTCCTCCAATACTTTTGGCGTTAAATTATATATATTTTATGAGTATTTTAGCCAAAAATTGAT
GGAAAATTTTTTCAGGTCATTTTTTACAAAATCTTAGCCAAAATCGTGTACTATCCATCACGATT
TCTAGCTAAAAACGCGTTTTGGGACCCTAGCTTAGTTTTGCATGATTTTTGGCACCGAGACTCCT
TGAAATATCTATATTCATCAAATCAAATCTCAGCCACATTGAATTTAAGGATTTGTTTTTACGAG
CATCTGAATCATGTTTCGATTTAATTAG
Found at i:18006 original size:548 final size:550
Alignment explanation
Indices: 16858--18158 Score: 2421
Period size: 548 Copynumber: 2.4 Consensus size: 550
16848 TTGCAGAATT
16858 TATCCATCACGATTTTTAGCTAAAAACGCGTTTTGGGACCCTGGCTTAGTTTTGCATGATTTTTG
1 TATCCATCACGATTTTTAGCTAAAAACGCGTTTTGGGACCCTGGCTTAGTTTTGCATGATTTTTG
16923 GCACCGAGACTCCTTGAAATATCTATATTCATCAAATCAAATCTCAGCCAAATTGAATTTAAGGA
66 GCACCGAGACTCCTTGAAATATCTATATTCATCAAATCAAATCTCAGCCAAATTGAATTTAAGGA
*
16988 TTTGTTTTTACGAGCATCTGAATCTTGTTTCGATTTAATTAGAAATTGAGAAAATAACTTTCAAG
131 TTTGTTTTTACGAGCATCTGAATCATGTTTCGATTTAATTAGAAATTGAGAAAATAACTTTCAAG
*
17053 TCAATTTTTTCAAGATTCTAGCCGAAATCGCGGTTTTTGGCTAAAAATGCGTTTCGGGGCACCGG
196 TCAATTTTTTCAAGATTCTAGCCGAAATCGCGGTTTTTGGCTAAAAATGCGTTTCGGGACACCGG
17118 CTTAATTTTGCAAGATTTTTGGCGCCGAGACTCCTTGAAATATCTATATTCATCTAATCAAATCA
261 CTTAATTTTGCAAGATTTTTGGCGCCGAGACTCCTTGAAATATCTATATTCATCTAATCAAATCA
* *
17183 CAGCTACATTGGATTTAAGGATTTATTTTTATGATCATCTGAATGTTTTTTCGATTTCATTAGAA
326 CAGCTACATTGGATTTAAGGATTTATTTTTATGATCATCTGAATCTTTTTTCGATTTAATTAGAA
* ** *
17248 ATTAATTCAGAAAAATATAAAAAACGATATTAAAAGCTTGAAGAGTCCTCCAATTTTTTTGGCGT
391 ATTAATTCAGAAAAATATAAAAAACGATATTAAAAGCGTGAAGAGTCCTCCAATACTTTTGACGT
*
17313 TAAATTATATATATATTTCATGAGTATTTTAGCCAAAAATTGATGGAAAATTTTTTCAGGTCATT
456 TAAATTATATATATATTTCATGAGTATTTTAGCCAAAAATTGATGGAAAAATTTTTCAGGTCATT
17378 TTTTACAAAATCTTAGCCAAAATCGTGTAC
521 TTTTACAAAATCTTAGCCAAAATCGTGTAC
*
17408 TATCCATCACAATTTTTAGCT-AAAACGCGTTTTGGGACCCTGGC-TAGTTTTGCATGATTTTTG
1 TATCCATCACGATTTTTAGCTAAAAACGCGTTTTGGGACCCTGGCTTAGTTTTGCATGATTTTTG
17471 GCACCGAGACTCCTTGAAATATCTATATTCATCAAATCAAATCTCAGCCAAATTGAATTTAAGGA
66 GCACCGAGACTCCTTGAAATATCTATATTCATCAAATCAAATCTCAGCCAAATTGAATTTAAGGA
17536 TTTGTTTTTACGAGCATCTGAATCATGTTTCGATTTAATTAGAAATTGAGAAAATAACTTTCAAG
131 TTTGTTTTTACGAGCATCTGAATCATGTTTCGATTTAATTAGAAATTGAGAAAATAACTTTCAAG
*
17601 TCAATTTTTTCAAGATTCTAGCCGAAATCGCGGTTTTTGGCTAAAAATGCGTTTCGGGACACTGG
196 TCAATTTTTTCAAGATTCTAGCCGAAATCGCGGTTTTTGGCTAAAAATGCGTTTCGGGACACCGG
17666 CTTAATTTTGCAAGATTTTTGGCGCCGAGACTCCTTGAAATATCTATATTCATCTAATCAAATCA
261 CTTAATTTTGCAAGATTTTTGGCGCCGAGACTCCTTGAAATATCTATATTCATCTAATCAAATCA
17731 CAGCTACATTGGATTTAAGGATTTATTTTTATGATCATCTGAATCTTTTTTCGATTTAATTAGAA
326 CAGCTACATTGGATTTAAGGATTTATTTTTATGATCATCTGAATCTTTTTTCGATTTAATTAGAA
17796 ATTAATTCAGAAAAATATAAAAAACGATATTAAAAGCGTGAAGAGTCCTCCAATACTTTTGACGT
391 ATTAATTCAGAAAAATATAAAAAACGATATTAAAAGCGTGAAGAGTCCTCCAATACTTTTGACGT
17861 TAAATTATATATAT-TTT-ATGAGTATTTTAGCCAAAAATTGATGGAAAAATTTTTCAGGTCATT
456 TAAATTATATATATATTTCATGAGTATTTTAGCCAAAAATTGATGGAAAAATTTTTCAGGTCATT
* *
17924 TTTTGCAAAATTTTAGCCAAAATCGTGTAC
521 TTTTACAAAATCTTAGCCAAAATCGTGTAC
* * *
17954 TATCCATCACGGTTTCTAGCTAAAAACACGTTTTGGGACCCTGGCTTAGTTTTGCATGATTTTTG
1 TATCCATCACGATTTTTAGCTAAAAACGCGTTTTGGGACCCTGGCTTAGTTTTGCATGATTTTTG
*
18019 GCACCGAGACTCCTTGAAATATCTATATTCATCAAATCAAATCTCAGCCACATTGAATTTAAGGA
66 GCACCGAGACTCCTTGAAATATCTATATTCATCAAATCAAATCTCAGCCAAATTGAATTTAAGGA
18084 TTTGTTTTTACGAGCATCTGAATCATGTTTCGATTTAATTAGAAATTGAGAAAATAACTTTCAAG
131 TTTGTTTTTACGAGCATCTGAATCATGTTTCGATTTAATTAGAAATTGAGAAAATAACTTTCAAG
18149 TCAATTTTTT
196 TCAATTTTTT
18159 TGGCTAAAAA
Statistics
Matches: 731, Mismatches: 18, Indels: 6
0.97 0.02 0.01
Matches are distributed among these distances:
546 91 0.12
547 25 0.03
548 572 0.78
549 23 0.03
550 20 0.03
ACGTcount: A:0.32, C:0.16, G:0.15, T:0.37
Consensus pattern (550 bp):
TATCCATCACGATTTTTAGCTAAAAACGCGTTTTGGGACCCTGGCTTAGTTTTGCATGATTTTTG
GCACCGAGACTCCTTGAAATATCTATATTCATCAAATCAAATCTCAGCCAAATTGAATTTAAGGA
TTTGTTTTTACGAGCATCTGAATCATGTTTCGATTTAATTAGAAATTGAGAAAATAACTTTCAAG
TCAATTTTTTCAAGATTCTAGCCGAAATCGCGGTTTTTGGCTAAAAATGCGTTTCGGGACACCGG
CTTAATTTTGCAAGATTTTTGGCGCCGAGACTCCTTGAAATATCTATATTCATCTAATCAAATCA
CAGCTACATTGGATTTAAGGATTTATTTTTATGATCATCTGAATCTTTTTTCGATTTAATTAGAA
ATTAATTCAGAAAAATATAAAAAACGATATTAAAAGCGTGAAGAGTCCTCCAATACTTTTGACGT
TAAATTATATATATATTTCATGAGTATTTTAGCCAAAAATTGATGGAAAAATTTTTCAGGTCATT
TTTTACAAAATCTTAGCCAAAATCGTGTAC
Done.