Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022444.1 Corchorus olitorius cultivar O-4 contig22477, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23266

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1916--1956
2
20.5
2
100
0
82
48
0
0
51
1.00
4909--4998
29
3.0
31
78
16
109
44
5
10
40
1.61
6659--7910
332
3.8
332
78
7
1233
33
14
16
35
1.89
7920--8551
333
1.9
331
83
4
806
34
15
14
36
1.88
8545--8577
2
16.5
2
100
0
66
48
0
0
51
1.00
8702--9984
330
3.9
330
77
7
1206
31
13
15
39
1.87
10480--10507
14
2.0
14
100
0
56
21
35
21
21
1.96
12842--13427
165
3.5
164
76
5
572
31
14
25
28
1.95
19124--19238
57
2.0
57
89
0
176
23
26
23
26
2.00

Tables:   1

The End!