Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022452.1 Corchorus olitorius cultivar O-4 contig22485, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15144

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
132--178
25
1.9
24
95
4
85
55
8
6
29
1.55
4352--4383
16
2.1
16
94
5
57
21
3
0
75
0.95
4439--4479
20
2.0
21
95
4
75
39
14
26
19
1.90
8320--8403
29
2.9
29
85
7
125
47
21
25
5
1.73
8379--8515
18
8.4
17
67
25
91
46
21
26
5
1.72
8350--8542
47
4.1
47
93
2
334
47
21
25
5
1.71
8790--8858
29
2.4
29
85
2
95
26
15
34
23
1.95
10192--12616
667
3.7
658
80
6
2394
33
14
14
37
1.87
10190--12616
333
7.3
331
79
5
2303
33
14
14
37
1.87

Tables:   1

The End!