Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022455.1 Corchorus olitorius cultivar O-4 contig22488, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16756

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
139--546
202
2.0
201
93
2
694
43
8
11
36
1.71
656--736
39
2.0
40
90
2
128
35
4
8
50
1.55
971--1051
39
2.0
40
88
2
119
35
6
7
50
1.55
582--1204
315
2.0
314
98
0
1201
43
8
9
39
1.67
1350--1486
68
2.0
68
100
0
274
32
20
18
27
1.96
9974--10034
30
2.0
30
90
0
95
26
24
9
39
1.86
11399--11475
31
2.5
31
86
0
109
35
11
19
33
1.88
13917--14058
49
3.0
47
81
9
160
49
5
16
28
1.68
16678--16751
15
5.0
14
78
12
69
13
25
24
36
1.92
16683--16751
30
2.3
30
87
5
95
13
26
26
34
1.92

Tables:   1

The End!