Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022457.1 Corchorus olitorius cultivar O-4 contig22490, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23103

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4116--4164
24
2.0
24
92
0
80
30
4
44
20
1.70
5403--5461
22
2.7
23
86
7
86
33
32
5
28
1.79
13063--13226
60
2.7
60
87
0
229
35
15
19
28
1.93
13060--13227
31
5.5
31
69
8
112
35
16
19
29
1.93
13330--13434
31
3.5
31
69
10
99
28
18
16
37
1.92
13268--13431
60
2.7
60
88
2
220
29
18
16
35
1.93
14701--14740
21
1.9
21
84
0
53
45
0
10
45
1.37
23027--23068
3
13.7
3
85
5
57
35
2
0
61
1.09
23075--23103
2
14.5
2
100
0
58
48
0
0
51
1.00

Tables:   1

The End!