Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022460.1 Corchorus olitorius cultivar O-4 contig22493, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17798

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1243--1410
31
5.5
31
71
16
154
32
22
19
26
1.97
1187--1409
60
3.7
60
91
1
342
34
20
18
27
1.96
1451--1616
31
5.5
29
68
13
104
27
21
17
34
1.95
1452--1613
60
2.7
59
83
7
209
27
20
16
35
1.94
3264--3315
21
2.5
20
81
12
59
13
9
19
57
1.63
3436--3478
21
2.1
20
82
4
50
48
2
4
44
1.36
4003--4274
109
2.5
110
81
8
308
41
9
7
41
1.65
4003--4291
107
2.7
104
77
12
300
41
8
6
42
1.63
4003--4286
112
2.6
110
80
10
336
40
9
7
42
1.64
4554--4620
35
1.9
35
88
8
102
19
0
17
62
1.33
4544--4627
35
2.4
35
82
5
100
17
0
21
60
1.36
6223--6462
126
1.8
130
90
7
389
48
1
11
38
1.49
11063--11142
37
2.2
37
97
2
153
22
11
12
53
1.70

Tables:   1

The End!