Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022461.1 Corchorus olitorius cultivar O-4 contig22494, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23048

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3998--4105
43
2.5
43
92
0
180
19
28
12
38
1.89
4552--4791
120
2.0
122
85
3
333
14
20
22
42
1.88
4862--5234
40
9.2
40
93
1
593
36
6
27
30
1.82
4862--5234
81
4.6
81
93
0
613
36
6
27
30
1.82
4862--5234
121
3.1
122
92
1
624
36
6
27
30
1.82
7601--8447
333
2.5
332
78
7
903
34
16
15
33
1.90
10137--11837
655
2.6
644
84
5
2110
37
14
14
33
1.88
13825--14145
50
6.4
50
92
0
543
33
25
33
6
1.82
13825--14145
151
2.1
150
94
0
552
33
25
33
6
1.82

Tables:   1

The End!