Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022468.1 Corchorus olitorius cultivar O-4 contig22501, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  32671

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
674--744
37
1.9
37
88
0
106
36
9
18
35
1.84
3698--6171
318
7.5
320
77
9
1779
33
13
15
37
1.87
6797--6828
13
2.5
13
94
0
55
75
15
9
0
1.05
7247--7294
21
2.2
21
85
3
60
14
0
27
58
1.37
7394--7441
20
2.4
20
100
0
96
31
14
39
14
1.86
11885--11940
25
2.2
25
93
0
94
32
17
7
42
1.77
12807--12836
13
2.4
12
94
5
51
53
0
0
46
1.00
15897--16152
88
3.0
87
94
2
446
23
6
25
44
1.78
16071--16279
106
2.0
107
93
0
357
28
9
22
40
1.84
16143--16418
144
1.9
147
87
2
414
29
10
18
41
1.84
16941--16974
14
2.4
14
95
0
59
23
8
0
67
1.18
19758--20638
323
2.8
310
79
6
796
38
13
13
34
1.84
26609--26652
17
2.5
17
81
3
52
15
18
27
38
1.91
28386--28527
70
2.0
70
98
0
275
44
23
6
26
1.77

Tables:   1

The End!