Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: AWUE01022470.1 Corchorus olitorius cultivar O-4 contig22503, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 63771
ACGTcount: A:0.33, C:0.18, G:0.17, T:0.33
Found at i:923 original size:6 final size:6
Alignment explanation
Indices: 908--941 Score: 61
Period size: 6 Copynumber: 5.8 Consensus size: 6
898 GGCTTTTCTT
908 TTTTAA -TTTAA TTTTAA TTTTAA TTTTAA TTTTA
1 TTTTAA TTTTAA TTTTAA TTTTAA TTTTAA TTTTA
942 CATTCAAAAA
Statistics
Matches: 27, Mismatches: 0, Indels: 2
0.93 0.00 0.07
Matches are distributed among these distances:
5 5 0.19
6 22 0.81
ACGTcount: A:0.32, C:0.00, G:0.00, T:0.68
Consensus pattern (6 bp):
TTTTAA
Found at i:3866 original size:7 final size:7
Alignment explanation
Indices: 3848--3880 Score: 59
Period size: 7 Copynumber: 4.9 Consensus size: 7
3838 ATACAAGCAA
3848 TCTCAA-
1 TCTCAAT
3854 TCTCAAT
1 TCTCAAT
3861 TCTCAAT
1 TCTCAAT
3868 TCTCAAT
1 TCTCAAT
3875 TCTCAA
1 TCTCAA
3881 AGTTTTGTTA
Statistics
Matches: 26, Mismatches: 0, Indels: 1
0.96 0.00 0.04
Matches are distributed among these distances:
6 6 0.23
7 20 0.77
ACGTcount: A:0.30, C:0.30, G:0.00, T:0.39
Consensus pattern (7 bp):
TCTCAAT
Found at i:28153 original size:3 final size:3
Alignment explanation
Indices: 28145--28186 Score: 84
Period size: 3 Copynumber: 14.0 Consensus size: 3
28135 TCAACAATAC
28145 TTA TTA TTA TTA TTA TTA TTA TTA TTA TTA TTA TTA TTA TTA
1 TTA TTA TTA TTA TTA TTA TTA TTA TTA TTA TTA TTA TTA TTA
28187 CAAGGGAGCC
Statistics
Matches: 39, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
3 39 1.00
ACGTcount: A:0.33, C:0.00, G:0.00, T:0.67
Consensus pattern (3 bp):
TTA
Found at i:31823 original size:30 final size:30
Alignment explanation
Indices: 31782--31838 Score: 96
Period size: 30 Copynumber: 1.9 Consensus size: 30
31772 AGCTCATAGA
* *
31782 CAATTTCCTCTATTATGGACTTCCAAAGTT
1 CAATATCCTCTATTATGGACATCCAAAGTT
31812 CAATATCCTCTATTATGGACATCCAAA
1 CAATATCCTCTATTATGGACATCCAAA
31839 ATTGTTGCAG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
30 25 1.00
ACGTcount: A:0.32, C:0.25, G:0.09, T:0.35
Consensus pattern (30 bp):
CAATATCCTCTATTATGGACATCCAAAGTT
Found at i:37439 original size:56 final size:56
Alignment explanation
Indices: 37367--37480 Score: 210
Period size: 56 Copynumber: 2.0 Consensus size: 56
37357 TTTATTTTAT
* *
37367 AGAATAATTAAGTAGAGATAGGGGGATATGATTTATTATAACATTTATTGTGTGAA
1 AGAATAATTAAGTAGAGATAGGGGGATAGGATTTATTATAACATTTATTGTATGAA
37423 AGAATAATTAAGTAGAGATAGGGGGATAGGATTTATTATAACATTTATTGTATGAA
1 AGAATAATTAAGTAGAGATAGGGGGATAGGATTTATTATAACATTTATTGTATGAA
37479 AG
1 AG
37481 GAAATGGATA
Statistics
Matches: 56, Mismatches: 2, Indels: 0
0.97 0.03 0.00
Matches are distributed among these distances:
56 56 1.00
ACGTcount: A:0.40, C:0.02, G:0.24, T:0.34
Consensus pattern (56 bp):
AGAATAATTAAGTAGAGATAGGGGGATAGGATTTATTATAACATTTATTGTATGAA
Found at i:37708 original size:16 final size:16
Alignment explanation
Indices: 37666--37709 Score: 56
Period size: 16 Copynumber: 2.8 Consensus size: 16
37656 TAATATGTAG
37666 TATATATA-ATATATA
1 TATATATAGATATATA
*
37681 TATATATGGATATATA
1 TATATATAGATATATA
37697 TATAGT-TAGATAT
1 TATA-TATAGATAT
37710 TGGCTTATAT
Statistics
Matches: 25, Mismatches: 2, Indels: 3
0.83 0.07 0.10
Matches are distributed among these distances:
15 7 0.28
16 17 0.68
17 1 0.04
ACGTcount: A:0.45, C:0.00, G:0.09, T:0.45
Consensus pattern (16 bp):
TATATATAGATATATA
Found at i:42232 original size:32 final size:30
Alignment explanation
Indices: 42191--42274 Score: 123
Period size: 30 Copynumber: 2.7 Consensus size: 30
42181 AACAGTAATT
42191 AAGTTGGTAATCTTTTTTTTTTTTAGAGAAAA
1 AAGTTGGTAATCTTTTTTTTTTTT--AGAAAA
*
42223 AAGTTGGTAATCTTTTTTCTTTTTAGAAAA
1 AAGTTGGTAATCTTTTTTTTTTTTAGAAAA
* *
42253 AAGTTAGTAATCTATTTTTTTT
1 AAGTTGGTAATCTTTTTTTTTT
42275 ATCAAATAAT
Statistics
Matches: 48, Mismatches: 4, Indels: 2
0.89 0.07 0.04
Matches are distributed among these distances:
30 25 0.52
32 23 0.48
ACGTcount: A:0.30, C:0.05, G:0.13, T:0.52
Consensus pattern (30 bp):
AAGTTGGTAATCTTTTTTTTTTTTAGAAAA
Found at i:42251 original size:30 final size:31
Alignment explanation
Indices: 42191--42271 Score: 119
Period size: 32 Copynumber: 2.6 Consensus size: 31
42181 AACAGTAATT
*
42191 AAGTTGGTAATCTTTTTTTTTTTTAGAGAAAA
1 AAGTTGGTAATCTTTTTTCTTTTTA-AGAAAA
42223 AAGTTGGTAATCTTTTTTCTTTTT-AGAAAA
1 AAGTTGGTAATCTTTTTTCTTTTTAAGAAAA
*
42253 AAGTTAGTAATCTATTTTT
1 AAGTTGGTAATCT-TTTTT
42272 TTTATCAAAT
Statistics
Matches: 46, Mismatches: 2, Indels: 3
0.90 0.04 0.06
Matches are distributed among these distances:
30 18 0.39
31 5 0.11
32 23 0.50
ACGTcount: A:0.31, C:0.05, G:0.14, T:0.51
Consensus pattern (31 bp):
AAGTTGGTAATCTTTTTTCTTTTTAAGAAAA
Found at i:42587 original size:44 final size:44
Alignment explanation
Indices: 42532--42623 Score: 159
Period size: 44 Copynumber: 2.1 Consensus size: 44
42522 ATAGGATTGC
*
42532 CAAA-TCTCTAATTTCATTTATAACTACCAATATACAAAATACA
1 CAAACTCTCTAATTTCATCTATAACTACCAATATACAAAATACA
*
42575 CAAACTCTCTAATTTCATCTATAACTACCAATATACTAAATACA
1 CAAACTCTCTAATTTCATCTATAACTACCAATATACAAAATACA
42619 CAAAC
1 CAAAC
42624 AAATAAATTA
Statistics
Matches: 46, Mismatches: 2, Indels: 1
0.94 0.04 0.02
Matches are distributed among these distances:
43 4 0.09
44 42 0.91
ACGTcount: A:0.46, C:0.24, G:0.00, T:0.30
Consensus pattern (44 bp):
CAAACTCTCTAATTTCATCTATAACTACCAATATACAAAATACA
Found at i:43201 original size:20 final size:21
Alignment explanation
Indices: 43171--43209 Score: 62
Period size: 20 Copynumber: 1.9 Consensus size: 21
43161 ATTTTCTTTT
*
43171 CAATGTTTACTATATCAATCC
1 CAATGTTTACTAAATCAATCC
43192 CAAT-TTTACTAAATCAAT
1 CAATGTTTACTAAATCAAT
43210 TAGCAAATCC
Statistics
Matches: 17, Mismatches: 1, Indels: 1
0.89 0.05 0.05
Matches are distributed among these distances:
20 13 0.76
21 4 0.24
ACGTcount: A:0.38, C:0.21, G:0.03, T:0.38
Consensus pattern (21 bp):
CAATGTTTACTAAATCAATCC
Found at i:45131 original size:35 final size:35
Alignment explanation
Indices: 45092--45207 Score: 116
Period size: 35 Copynumber: 3.3 Consensus size: 35
45082 ACTGTCTTAT
*
45092 AAGCATATATCTATCTGCATCATTTATGTATCAAC
1 AAGCATACATCTATCTGCATCATTTATGTATCAAC
* * *
45127 AAGCATACATCTCA-CAT-CAATACATTCATCT-T--AT
1 AAGCATACATCT-ATC-TGC-AT-CATTTATGTATCAAC
*
45161 AAGCATATATCTATCTGCATCATTTATGTATCAAC
1 AAGCATACATCTATCTGCATCATTTATGTATCAAC
45196 AAGCATACATCT
1 AAGCATACATCT
45208 CACATCAATA
Statistics
Matches: 63, Mismatches: 9, Indels: 18
0.70 0.10 0.20
Matches are distributed among these distances:
32 7 0.11
33 5 0.08
34 14 0.22
35 25 0.40
36 5 0.08
37 7 0.11
ACGTcount: A:0.36, C:0.22, G:0.07, T:0.34
Consensus pattern (35 bp):
AAGCATACATCTATCTGCATCATTTATGTATCAAC
Found at i:45183 original size:69 final size:69
Alignment explanation
Indices: 45086--45225 Score: 280
Period size: 69 Copynumber: 2.0 Consensus size: 69
45076 CATCAAACTG
45086 TCTTATAAGCATATATCTATCTGCATCATTTATGTATCAACAAGCATACATCTCACATCAATACA
1 TCTTATAAGCATATATCTATCTGCATCATTTATGTATCAACAAGCATACATCTCACATCAATACA
45151 TTCA
66 TTCA
45155 TCTTATAAGCATATATCTATCTGCATCATTTATGTATCAACAAGCATACATCTCACATCAATACA
1 TCTTATAAGCATATATCTATCTGCATCATTTATGTATCAACAAGCATACATCTCACATCAATACA
45220 TTCA
66 TTCA
45224 TC
1 TC
45226 AGATCTGGAT
Statistics
Matches: 71, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
69 71 1.00
ACGTcount: A:0.36, C:0.24, G:0.06, T:0.35
Consensus pattern (69 bp):
TCTTATAAGCATATATCTATCTGCATCATTTATGTATCAACAAGCATACATCTCACATCAATACA
TTCA
Found at i:53655 original size:30 final size:30
Alignment explanation
Indices: 53621--53683 Score: 117
Period size: 30 Copynumber: 2.1 Consensus size: 30
53611 TTTATCTTGA
53621 CTTTTCTCTTATACCCTCAAATTTTAATGG
1 CTTTTCTCTTATACCCTCAAATTTTAATGG
*
53651 CTTTTCTCTTATACTCTCAAATTTTAATGG
1 CTTTTCTCTTATACCCTCAAATTTTAATGG
53681 CTT
1 CTT
53684 ATTAACTATT
Statistics
Matches: 32, Mismatches: 1, Indels: 0
0.97 0.03 0.00
Matches are distributed among these distances:
30 32 1.00
ACGTcount: A:0.22, C:0.22, G:0.06, T:0.49
Consensus pattern (30 bp):
CTTTTCTCTTATACCCTCAAATTTTAATGG
Found at i:56139 original size:15 final size:16
Alignment explanation
Indices: 56114--56143 Score: 53
Period size: 15 Copynumber: 1.9 Consensus size: 16
56104 AATAATTATT
56114 TTTAGATTATAATATA
1 TTTAGATTATAATATA
56130 TTTA-ATTATAATAT
1 TTTAGATTATAATAT
56144 TATTATTTAT
Statistics
Matches: 14, Mismatches: 0, Indels: 1
0.93 0.00 0.07
Matches are distributed among these distances:
15 10 0.71
16 4 0.29
ACGTcount: A:0.43, C:0.00, G:0.03, T:0.53
Consensus pattern (16 bp):
TTTAGATTATAATATA
Found at i:57486 original size:331 final size:330
Alignment explanation
Indices: 56505--63771 Score: 7215
Period size: 331 Copynumber: 21.8 Consensus size: 330
56495 ACTTTACATT
* * * * ** * *
56505 ATCTAATCAAATCTTAACAACATTGGATTTAAAAATTTATTTTTACGAGCATCTAATTAAATCTT
1 ATCTAATAAAATCTCAGCCACATTGGATTTAAGGATTTGTTTTTACGAGCATC----TGAATCTT
* * * * * * * * *
56570 ATTTCGATTTAATTAGAAATTATTTTAGAAAAAATAAGAAATACAATATTAAAAGCGTGGAACGC
62 GTTTCGATTTAATTAGAAATTAATTCA-AAAAAATAGGAAAAACGATATTAGAAGCGTGAAAAGC
* * * * * *
56635 CGTCCAATGTTTTTGGCGTTCAATTATATATTTTTATGAGAATTTTAGCCAAAAATTGAGGAGAA
126 CCTTCAATCTTTTTGGCATTAAATTATATATTTTTATGAGTATTTTAGCCAAAAATTGAGGA-AA
* * * *
56700 -ATCTTTCAGAGTCAACTTTTTTATAAAATTTTAGCCAAAATCGTGTACTAGCTAACCATCAAGG
190 TATCTTTC-GGGTC-A-TTTTTTACAAAATTTTAGCCGAAATCGTG---TA-CTAACCATCACGG
** * * ** * * * *
56764 TTTTTAACTAAAAACGCGTTCCGGGGATCCGCCTCAATTTTGCATGATTTTTGGCTCCGAGACTA
248 TTTTTGGCTAAAAACGCGTTTCGAGGCCCCGACTCAGTTTTGCATGATTTTTGGCGCCGAGACTC
*
56829 CTTGAAATTTCTATATTC
313 CTTGAAATATCTATATTC
* * * * *
56847 ATCTAATCAAATCTTAGCCACATTGGATTTAAGGATTTCTTTTTACGAGCATCTAAATCTTGGTT
1 ATCTAATAAAATCTCAGCCACATTGGATTTAAGGATTTGTTTTTACGAGCATCTGAATCTTGTTT
* * *
56912 CGATTTAATCAGCATTTAATTCGGAAATAAAATAGGAAAAACGATATTAGAAGCGTGAAAAAGCC
66 CGATTTAATTAGAAATTAATTC--AAA-AAAATAGGAAAAACGATATTAGAAGCGTG-AAAAGCC
* * * *
56977 CTTCAATCTTTTTGGCGTTGAATTTTACATTTTTATGAGT-TTTTGAG-CAAAAAGTTGAGGAAA
127 CTTCAATCTTTTTGGCATTAAATTATATATTTTTATGAGTATTTT-AGCCAAAAA-TTGAGGAAA
* * * * * * * **
57040 TATCTTTCGGTTAAATTTTTACAAAATTTTAGCCGAAATCATATAATAAACATCACAATTTTTGG
190 TATCTTTCGGGTCATTTTTTACAAAATTTTAGCCGAAATCGTGTACTAACCATCACGGTTTTTGG
** * * * * * *
57105 CTAAAAAAACGTTCCGAGGTCCTGTCTCAGTTTTGCATGATTTTTGGCGCCAAGACTCCTTGAGA
255 CTAAAAACGCGTTTCGAGGCCCCGACTCAGTTTTGCATGATTTTTGGCGCCGAGACTCCTTGAAA
* *
57170 TATCCATATAC
320 TATCTATATTC
* * * *
57181 TTCTATTAAAATCTCAGCCACATAGGATTTAAGAATTTGTTTTTACGAGCATCTGAATCTTGTTT
1 ATCTAATAAAATCTCAGCCACATTGGATTTAAGGATTTGTTTTTACGAGCATCTGAATCTTGTTT
* *
57246 CGATTTAATTAGAAATTAATTCAAAAAAATATGAAAAACGATATTCA-AAGCGTGAAAAGTCC-T
66 CGATTTAATTAGAAATTAATTCAAAAAAATAGGAAAAACGATATT-AGAAGCGTGAAAAGCCCTT
* *
57309 CGAATCTTTTTGGCATTAAATTATATATATTTTATGAGTATTTTATCCAAAAATTGAGGAAACAT
130 C-AATCTTTTTGGCATTAAATTATATAT-TTTTATGAGTATTTTAGCCAAAAATTGAGGAAATAT
* * ** * *
57374 TTTTCGGATCATTTTTTTACAAAATTTTAGCTAAAATCGT-TACTAACCATCATGGTTTTTGGTT
193 CTTTCGGGTCA-TTTTTTACAAAATTTTAGCCGAAATCGTGTACTAACCATCACGGTTTTTGGCT
* *
57438 AAAAACGCGTTTCGGGGCCCCGACTCAATTTTGCATGATTTTTGGCGCCGAGACTCCTTGAAATA
257 AAAAACGCGTTTCGAGGCCCCGACTCAGTTTTGCATGATTTTTGGCGCCGAGACTCCTTGAAATA
57503 TCTATATTC
322 TCTATATTC
* * * * * ** * * *
57512 ATCTAGTAAAATCTTACCCACATTGCATTTAAGGATTTGCTTTTACGAAAAACTAAATTTTGTTT
1 ATCTAATAAAATCTCAGCCACATTGGATTTAAGGATTTGTTTTTACGAGCATCTGAATCTTGTTT
* * * *
57577 CGATTTAATTAGAAATTATTTCAAAAAAATATGAAAAACGATATTAAAAGCGTGAAAAGTCCTTC
66 CGATTTAATTAGAAATTAATTCAAAAAAATAGGAAAAACGATATTAGAAGCGTGAAAAGCCCTTC
* * * * **
57642 AATCTTTTTGCCGTTAAATTATATATTCTTTATGAGTATTGTGGCTTAAAATTGAGGAAATATCT
131 AATCTTTTTGGCATTAAATTATATATT-TTTATGAGTATTTTAGCCAAAAATTGAGGAAATATCT
* * * * * *
57707 TTCGGGTCAATTTTTTGCAAAATTTCAACCGAAATCGTTTACGTTAGTCGAAATCACGGTTTTTG
195 TTCGGGTC-ATTTTTTACAAAATTTTAGCCGAAATCGTGTAC--TA-AC--CATCACGGTTTTTG
* ** * *
57772 ACTAAAAACGCG-TTCTGTTGCCACGACTCTA-TTTTGCATGATTTTTGGCGCAGAGACTCCTTG
254 GCTAAAAACGCGTTTC-GAGGCCCCGACTC-AGTTTTGCATGATTTTTGGCGCCGAGACTCCTTG
* *
57835 AAGTATCTTTATTC
317 AAATATCTATATTC
** * * * *
57849 ATCTAACCAAATCTCAACCACATTGGATTTAAGGATTTGTATTTGCGTGCATCTGAATCTTGTTT
1 ATCTAATAAAATCTCAGCCACATTGGATTTAAGGATTTGTTTTTACGAGCATCTGAATCTTGTTT
* * * *
57914 CGATTTAATCAGCAATTAATTTGGAAATAAAATAGGAAAAACGATATTAGAAGCGTGAAAAAGGC
66 CGATTTAATTAGAAATTAA-TT-CAAA-AAAATAGGAAAAACGATATTAGAAGCGTG-AAAAGCC
* * * * *
57979 TTTCAAT-TTTTTGGCGTTGAATTATATATTTTTTATGAGTACTTTTA-CTAGAAATTGAGGAAA
127 CTTCAATCTTTTTGGCATTAAATTATATA-TTTTTATGAGTA-TTTTAGCCAAAAATTGAGGAAA
* * * * * * * * *
58042 AATCTTTCGGATCAATTTTTGCAAAATTTTAGCCGAAAAT-GTGAACTCATCATCACAG-TTTTC
190 TATCTTTCGGGTCATTTTTTACAAAATTTTAGCCG-AAATCGTGTACTAACCATCACGGTTTTTG
* * * * *
58105 GCTAAAAACGCGTTCCG-GGACCC-AGCTCAGTTTTGCACGATTTTTGGTGCCAAGTA-TCCTTG
254 GCTAAAAACGCGTTTCGAGGCCCCGA-CTCAGTTTTGCATGATTTTTGGCGCCGAG-ACTCCTTG
*
58167 AAATATCTGTA--C
317 AAATATCTATATTC
** * * **
58179 ATCTAACCAAATCTCCGCCATATTGGATTTAAGGATTTCCTTTTACGAGCATCTGAATCTTGTTT
1 ATCTAATAAAATCTCAGCCACATTGGATTTAAGGATTTGTTTTTACGAGCATCTGAATCTTG-TT
* *
58244 TC-ATTTAATTAGAATTTAATTCAGATAAAAATAGGAAAAACAATATTAGAAGCGAT-AAAAGCC
65 TCGATTTAATTAGAAATTAATTCA-A-AAAAATAGGAAAAACGATATTAGAAGCG-TGAAAAGCC
* * * * *
58307 CTTCAATCTTTTT--TATGTCGAATTATATATTTTTTATGACTATTTCAGCCAAAAATTAAGGAA
127 CTTCAATCTTTTTGGCAT-T-AAATTATATA-TTTTTATGAGTATTTTAGCCAAAAATTGAGGAA
* *
58370 ATATCTTTCGGG----TTTGTA-AAAA-TTTAGCTGAAATC--G---------TCACGGTTTTTT
189 ATATCTTTCGGGTCATTTTTTACAAAATTTTAGCCGAAATCGTGTACTAACCATCACGG-TTTTT
* * * * ** * * * * * *
58418 AGCTAAAAAAGCGTTTCCGGGGCCACGACTTTGTTTTGCATGATTTTTGACACGGGGGCTCTTTG
253 GGCTAAAAACGCGTTT-CGAGGCCCCGACTCAGTTTTGCATGATTTTTGGCGCCGAGACTCCTTG
* *
58483 AAATATCTTTCTTC
317 AAATATCTATATTC
* * *
58497 ATCTAA-ACCAAATCTCAGCCACATTGGGTTTAAGGATTTGTTTTTACGTGCATTTGAATCTTGT
1 ATCTAATA--AAATCTCAGCCACATTGGATTTAAGGATTTGTTTTTACGAGCATCTGAATCTTGT
* ** *
58561 TTCGATTTAATCATCAATTAATTTGGAAATAAAATAGGAAAAACGATATTAGAAGCGTGAAAAAG
64 TTCGATTTAATTAGAAATTAA-TT-CAAA-AAAATAGGAAAAACGATATTAGAAGCGTG-AAAAG
* **
58626 CCCTTCAATCTTTTTGG-AGTTGAATTATATATTTTTATGAGTATTTTAGAAAAAAATTGAGGAA
125 CCCTTCAATCTTTTTGGCA-TTAAATTATATATTTTTATGAGTATTTTAGCCAAAAATTGAGGAA
* * * *
58690 ATATCTTTCGGGTCAATTTTTACAAAATTTTAGCCGAAATCGTGTAATAACCATCACAGTTTATG
189 ATATCTTTCGGGTCATTTTTTACAAAATTTTAGCCGAAATCGTGTACTAACCATCACGGTTTTTG
* * * * *
58755 GCTGAAAAA-GCGTTCCGAGGTCCTGCCTCAGTTTTGTATGATTTTTGGCGCCGAGACTCCTTGA
254 GCT-AAAAACGCGTTTCGAGGCCCCGACTCAGTTTTGCATGATTTTTGGCGCCGAGACTCCTTGA
* * *
58819 GATATCCATATAC
318 AATATCTATATTC
* * *
58832 TTCTAATCAAATCTCAGCCACATTGGATTTAA-GATTTTGTTTATACGAGCATCTGAATCTTGTT
1 ATCTAATAAAATCTCAGCCACATTGGATTTAAGGA-TTTGTTTTTACGAGCATCTGAATCTTGTT
* * * * * *
58896 TTGATTTAAATAGAAATTAATTCAAAAAAATATGAAAAACGATATTAAAAGCGTGAAAAGTCCTC
65 TCGATTTAATTAGAAATTAATTCAAAAAAATAGGAAAAACGATATTAGAAGCGTGAAAAGCCCTT
* * * * *
58961 CAATCTTTTTGACATTAAATTATATATATTTAATGAGTATTTTATCCAAAAATTGGGGAAACAT-
130 CAATCTTTTTGGCATTAAATTATATAT-TTTTATGAGTATTTTAGCCAAAAATTGAGGAAATATC
* * * *
59025 TTATCGGGTCATTTTTTACAAAATTTTAGCCAAAATCGTATACTAATCATCATGGTTTTTGGCTA
194 TT-TCGGGTCATTTTTTACAAAATTTTAGCCGAAATCGTGTACTAACCATCACGGTTTTTGGCTA
* * * * *
59090 AAAACGTGTGTCGAGGCCCCGACTCAGTTTTGCCTGATTTTTGGCGACAAGACTCCTTGAAATAT
258 AAAACGCGTTTCGAGGCCCCGACTCAGTTTTGCATGATTTTTGGCGCCGAGACTCCTTGAAATAT
59155 CTATATTC
323 CTATATTC
* * * ** * *
59163 ATCTAATAAAATCTTAGCCACTTTGCATTTAAGGATTTGTTTTTACGAAAATCTAAATTTTGTTT
1 ATCTAATAAAATCTCAGCCACATTGGATTTAAGGATTTGTTTTTACGAGCATCTGAATCTTGTTT
* *
59228 CGATTTAATTAGAAATTATTTCAGAAAAAATATGAAAAACGATATTAGAAGCGTGAAAAGCCCTT
66 CGATTTAATTAGAAATTAATTCA-AAAAAATAGGAAAAACGATATTAGAAGCGTGAAAAGCCCTT
* * * * * * *
59293 CAATCTTTTTGGCGTTAAATTATAAATTCTTTTTGAGAATTGTGGCTAAAAATTGAGGAAATATC
130 CAATCTTTTTGGCATTAAATTATATATT-TTTATGAGTATTTTAGCCAAAAATTGAGGAAATATC
* * * * *
59358 TTTCGGGTCAATTTTTTGCAAAATTTCAACCGAAATCGTGTACCTTAGTCGAAATCACGGTTTTT
194 TTTCGGGTC-ATTTTTTACAAAATTTTAGCCGAAATCGTGTA-C-TA-AC--CATCACGG--TTT
* * * * ** *
59423 TTGACTAAAAACGAGTTTTGTGGCCATGACATC-GTTTTGCATGATTTTTGGTGCCGAGACTCCT
251 TTGGCTAAAAACGCGTTTCGAGGCCCCGAC-TCAGTTTTGCATGATTTTTGGCGCCGAGACTCCT
* * *
59487 TGAATTATGTTTATTC
315 TGAAATATCTATATTC
* *
59503 ATCTAA-ACAAATCTCAGCCACATTGGATTTAAGGATTTGTATTTACGAGCATTTGAATCTTG-T
1 ATCTAATA-AAATCTCAGCCACATTGGATTTAAGGATTTGTTTTTACGAGCATCTGAATCTTGTT
* * * *
59566 TCGATTTAATCAGCAATTAATTTGGAAATAAAATAGGAAAAACGATATTAGAAGCGTGAAAAAAC
65 TCGATTTAATTAGAAATTAA-TT-CAAA-AAAATAGGAAAAACGATATTAGAAGCGTG-AAAAGC
* *
59631 CCTTCAATCGTTTTTGGCGTTGAATTATATATTTTTATGAGTATTTTAG-CAACAAATTGAGGAA
126 CCTTCAATC-TTTTTGGCATTAAATTATATATTTTTATGAGTATTTTAGCCAA-AAATTGAGGAA
* * * * * *
59695 ATATCTTCCGAGTCAGTTTTTACTAAATTTTAGCCGAAATCGTGTAATAACCATCACAGTTTTTG
189 ATATCTTTCGGGTCATTTTTTACAAAATTTTAGCCGAAATCGTGTACTAACCATCACGGTTTTTG
* * * * *
59760 GATAAAAA-GCGTTCCGAGG-TCCTATCTCAGTTTTGCATGATTTTTGGCGCCAAGACTCCTTGA
254 GCTAAAAACGCGTTTCGAGGCCCCGA-CTCAGTTTTGCATGATTTTTGGCGCCGAGACTCCTTGA
* * *
59823 GATATCCATATAC
318 AATATCTATATTC
* * * *
59836 TTCTAATCAAATCTCAGCCAAATTGTATTTAA-GATTTTGTTTTTACGAGCATCTGAATCTTGTT
1 ATCTAATAAAATCTCAGCCACATTGGATTTAAGGA-TTTGTTTTTACGAGCATCTGAATCTTGTT
* * * *
59900 TCTATTTAAATAGAAATTAATTCAAAAAAATATGAAAAACGATATTAAAAGCGTGAAAAGTACCC
65 TCGATTTAATTAGAAATTAATTCAAAAAAATAGGAAAAACGATATTAGAAGCGTGAAAAG--CCC
* * *
59965 --CAATCTTTTTGGCATTAAATTATATATATTTAATGAGTATTTTATG-CAAAAATTGGGGAAAC
128 TTCAATCTTTTTGGCATTAAATTATATAT-TTTTATGAGTATTTTA-GCCAAAAATTGAGGAAAT
* *
60027 AT-TTATCGGGTCATTTTTTACAAAATTTTAGCCAAAATCGTGTACTAACCATCATGGTTTTTGG
191 ATCTT-TCGGGTCATTTTTTACAAAATTTTAGCCGAAATCGTGTACTAACCATCACGGTTTTTGG
* *
60091 CTAAAAACGTGTTTCGAGGCCCCGACTCAGTTTTGCATGAGTTTTGGCGCCGAGACTCCTTGAAA
255 CTAAAAACGCGTTTCGAGGCCCCGACTCAGTTTTGCATGATTTTTGGCGCCGAGACTCCTTGAAA
60156 TATCTATATTC
320 TATCTATATTC
* * * * * ** * *
60167 ATCTAATAAAATCTTAGTCACTTTGCATTTACGGATTTGTTTTTACGAAAATCTAAATTTTGTTT
1 ATCTAATAAAATCTCAGCCACATTGGATTTAAGGATTTGTTTTTACGAGCATCTGAATCTTGTTT
* * * *
60232 TGATTTAATTAGAAATTATTTCAGAAAAAATATG-AAAACGATATTAGAAGCATGAAAAGCCCTT
66 CGATTTAATTAGAAATTAATTCA-AAAAAATAGGAAAAACGATATTAGAAGCGTGAAAAGCCCTT
* * * * * *
60296 CGATCTTTTTGGCGTTAAATTATATATCTTTATGAGTATTGTGGCTAAAAATTGAGGAAATATCT
130 CAATCTTTTTGGCATTAAATTATATATTTTTATGAGTATTTTAGCCAAAAATTGAGGAAATATCT
* * * * * *
60361 TTCAGGGTCAATTTTTTGCAAAATTTCAACCGAAATCGTGTACGTTAGTCGAAATTACGGTTTTT
195 TTC-GGGTC-ATTTTTTACAAAATTTTAGCCGAAATCGTGTAC--TA-AC--CATCACGGTTTTT
* * * * *
60426 GACTAAAAACGCG-TTCTGTGGCCACAACTCTGTTTTGCATGATTTTTGGCGCCG-GAGCTCCTT
253 GGCTAAAAACGCGTTTC-GAGGCCCCGACTCAGTTTTGCATGATTTTTGGCGCCGAGA-CTCCTT
*
60489 -AAAGTATCTTTATTC
316 GAAA-TATCTATATTC
* * * *
60504 ATCTAACAAAATGTCAGCCACATTGGATTTAAGGATTTGTATTTACGAGCATTTGAATCTTGTTT
1 ATCTAATAAAATCTCAGCCACATTGGATTTAAGGATTTGTTTTTACGAGCATCTGAATCTTGTTT
* * * *
60569 CGATTTAATCAGCAATTAATTTGGAAATAAAATAGGAAAAAACGATATTAGAAGCATGAAAAGCC
66 CGATTTAATTAGAAATTAA-TT-CAAA-AAAATAGG-AAAAACGATATTAGAAGCGTGAAAAGCC
* * * *
60634 CTTCAATCTTTTTTGGCGTTGAATTATATATTTTTATTAGTATTTTA-CCAATAATTGAGGAAAT
127 CTTCAATC-TTTTTGGCATTAAATTATATATTTTTATGAGTATTTTAGCCAAAAATTGAGGAAAT
* * * *
60698 ATCTTT-GGGTCAATTTTTACAAAATTTTAGCCGAAATCGTGTAATAACCATCACAGTTTATGGC
191 ATCTTTCGGGTCATTTTTTACAAAATTTTAGCCGAAATCGTGTACTAACCATCACGGTTTTTGGC
* * * * * * * *
60762 TAAAAAAGCGTTCCGAGGTCCTGCCTCAGTTTTGTATGATTTTTGGCGCCAAGACTCCTTGAGAT
256 TAAAAACGCGTTTCGAGGCCCCGACTCAGTTTTGCATGATTTTTGGCGCCGAGACTCCTTGAAAT
* * *
60827 TTCCATATAC
321 ATCTATATTC
* *
60837 TTCTAATCAAATCTCAGCCACATTGGATTTAA-GATTTTGTTTTTACGAGCATCTGAATCTTGTT
1 ATCTAATAAAATCTCAGCCACATTGGATTTAAGGA-TTTGTTTTTACGAGCATCTGAATCTTGTT
* * * * *
60901 TTGATTTAAATAGAAATTAATTCAAAAAATATATGAAAAACGATATTAAAAGCGTGAAAAGTCCT
65 TCGATTTAATTAGAAATTAATTCAAAAAA-ATAGGAAAAACGATATTAGAAGCGTGAAAAGCCCT
* * * * *
60966 CCAATCTTTTTGGCATTAAATTATATATATTTAATGAGTATTTTATCCAAAAATTGGGGAAACAT
129 TCAATCTTTTTGGCATTAAATTATATAT-TTTTATGAGTATTTTAGCCAAAAATTGAGGAAATAT
* *
61031 -TTATCGGGTCATTTTTTACAAAATTTTAGCCAAAATCGTGTACTAACCATCATGGTTTTTGGCT
193 CTT-TCGGGTCATTTTTTACAAAATTTTAGCCGAAATCGTGTACTAACCATCACGGTTTTTGGCT
* * * *
61095 AAAAACGCGTTTCGAGACCCCGACTCAGTTTTGCATAATTTTTGGTGCTGAGACTCCTTGAAATA
257 AAAAACGCGTTTCGAGGCCCCGACTCAGTTTTGCATGATTTTTGGCGCCGAGACTCCTTGAAATA
61160 TCTATATTC
322 TCTATATTC
* * * * ** * *
61169 ATCTAATAAAATCTTAGCCACATTGCATTTACGGATTTGTTATTACGAAAATCTAAATTTTGTTT
1 ATCTAATAAAATCTCAGCCACATTGGATTTAAGGATTTGTTTTTACGAGCATCTGAATCTTGTTT
* * **
61234 CGATTTAATTAGAAATTATTTCAGAGAAAATATAAAAAACGATATTAGAAGCGTGAAAAGCCCTT
66 CGATTTAATTAGAAATTAATTCA-AAAAAATAGGAAAAACGATATTAGAAGCGTGAAAAGCCCTT
* * * * *
61299 CAATCTTTTTGGCGTTAAATTATATATCTTTATGAGTATTGTGGCTAAAAATTGAGG-AATATCT
130 CAATCTTTTTGGCATTAAATTATATATTTTTATGAGTATTTTAGCCAAAAATTGAGGAAATATCT
* * * * * *
61363 TTCAGGGTCAATTTTTTGCAAAATTTCAACCGAAGTCGTGTACGTTAGTCGAAATCACGGTTTTT
195 TTC-GGGTC-ATTTTTTACAAAATTTTAGCCGAAATCGTGTAC--TA-AC--CATCACGGTTTTT
* * * * *
61428 GACTAAAAACGCG-TTCTGTGGCCACGACTCTGTTTTGCATGATTTTTGGCGCCGAAACTCCTTG
253 GGCTAAAAACGCGTTTC-GAGGCCCCGACTCAGTTTTGCATGATTTTTGGCGCCGAGACTCCTTG
* *
61492 AAGTATCTTTATTC
317 AAATATCTATATTC
** * * *
61506 ATCTAACCAAATCTCAACCACATTGGATTTAAGGATTTGTATTTACGAGCATTTGAATCTTGTTT
1 ATCTAATAAAATCTCAGCCACATTGGATTTAAGGATTTGTTTTTACGAGCATCTGAATCTTGTTT
* * * * *
61571 CGATTTAATCAGCAATTAATTTGGAAATAAAATAGGAAAAACGCTATTAGAAGCGTGTAAAGCCC
66 CGATTTAATTAGAAATTAA-TT-CAAA-AAAATAGGAAAAACGATATTAGAAGCGTGAAAAGCCC
* * * *
61636 TTCAATCTTTTTGACATTAAATTATATATTTTTTATGAGTATTGTGGCTAAAAATTGAGGAAATA
128 TTCAATCTTTTTGGCATTAAATTATATA-TTTTTATGAGTATTTTAGCCAAAAATTGAGGAAATA
* * * * * *
61701 TCTTTCGGGTCAATTTTTGCAAAATTTCAACCGAAATCGTGTACCTTAGTCGAAATCACGGTTTT
192 TCTTTCGGGTCATTTTTTACAAAATTTTAGCCGAAATCGTGTA-C-TA-AC--CATCACGG-TTT
* ** * * *
61766 TTGACTAAAAACAAG-TTCTGTGGCCACGACTTC-GTTTTGCATGATTTTT-GCGCCGAGACTCG
251 TTGGCTAAAAACGCGTTTC-GAGGCCCCGAC-TCAGTTTTGCATGATTTTTGGCGCCGAGACTCC
* *
61828 TTGAAGTATCTTTATTC
314 TTGAAATATCTATATTC
* * ** * * *
61845 ATATGACCAAATCTTAGCCACATTGGATTTAAGGATTTGTATTTACGAGCATTTGAATCTTGTTT
1 ATCTAATAAAATCTCAGCCACATTGGATTTAAGGATTTGTTTTTACGAGCATCTGAATCTTGTTT
* * * *
61910 CGATTTAATCA-ACAATTAATTTGGAAATAAAATAGGAAAAACGCTATTAGAAGCGTGTAAAGCC
66 CGATTTAATTAGA-AATTAA-TT-CAAA-AAAATAGGAAAAACGATATTAGAAGCGTGAAAAGCC
* * *
61974 CTTCAATCTTTTTGGCATTAAATTATATATTTTTTATGAGTATTGTGGCTAAAAATTGAGGAAAT
127 CTTCAATCTTTTTGGCATTAAATTATATA-TTTTTATGAGTATTTTAGCCAAAAATTGAGGAAAT
* * * * * *
62039 ATCTTTCGGGTCAATTTTTGCAAAATTTCAACCGAAATCGTGTACCTTAGTCGAAATCACGGATT
191 ATCTTTCGGGTCATTTTTTACAAAATTTTAGCCGAAATCGTGTA-C-TA-AC--CATCACGG-TT
* ** * *
62104 TTTGACTAAAAACAAG-TTCTGTGGCCACGACTTC-GTTTTGCATGATTTTTGGCGCCGAGACTC
250 TTTGGCTAAAAACGCGTTTC-GAGGCCCCGAC-TCAGTTTTGCATGATTTTTGGCGCCGAGACTC
* *
62167 CTTGAAGTATCTTTATTC
313 CTTGAAATATCTATATTC
** * * *
62185 ATCTAACCAAATCTCAGCCACATTGGATTTAAGGATTTATATTTACGAGCATTTGAATCTTGTTT
1 ATCTAATAAAATCTCAGCCACATTGGATTTAAGGATTTGTTTTTACGAGCATCTGAATCTTGTTT
* * *
62250 CGATTTAATCAGCAATTAATTTGGAAATAAAATAGGAAAAACGATATTAGAAGCGTGAAAAAGCC
66 CGATTTAATTAGAAATTAA-TT-CAAA-AAAATAGGAAAAACGATATTAGAAGCGTG-AAAAGCC
* *
62315 CTTCAATCTTTTTTGGCGTTGAATTATATATTTTTATGAGTATTTTAG-CAACAAATTGAGGAAA
127 CTTCAATC-TTTTTGGCATTAAATTATATATTTTTATGAGTATTTTAGCCAA-AAATTGAGGAAA
* * * * * * * *
62379 TATCTTCCGAGTCAGTTTTAACTAAATTTTAGCTGAAATCGTGTAATAACCATCACAGTTTTTGG
190 TATCTTTCGGGTCATTTTTTACAAAATTTTAGCCGAAATCGTGTACTAACCATCACGGTTTTTGG
* * * ** * * **
62444 CTAAAAAAGCGTTCCGAGGTCTTGTCTCAGTTTTGCATGATTTTTGGCGCCAAGACTCCTTGAGT
255 CTAAAAACGCGTTTCGAGGCCCCGACTCAGTTTTGCATGATTTTTGGCGCCGAGACTCCTTGAAA
* *
62509 TATCCATATAC
320 TATCTATATTC
* * *
62520 TTCTAATTAAATCTCAGCCACATTGGATTTAA-GATTTTGTTGTTACGAGCATCTGAATCTTGTT
1 ATCTAATAAAATCTCAGCCACATTGGATTTAAGGA-TTTGTTTTTACGAGCATCTGAATCTTGTT
* * * * * * * *
62584 TCGGTTTAAATAGACATTAATTCAAAAAAATAAGAAAAACGATATTAAAAGTGTGAAAAGTCCTC
65 TCGATTTAATTAGAAATTAATTCAAAAAAATAGGAAAAACGATATTAGAAGCGTGAAAAGCCCTT
* * * * *
62649 CAATCTTTTTGGCATTAAATTATATATATTTAATTAGTATTTTATCCAAAAATTGGGGAAACAT-
130 CAATCTTTTTGGCATTAAATTATATAT-TTTTATGAGTATTTTAGCCAAAAATTGAGGAAATATC
* *
62713 TTTCTGGGTCATTTTTTACAAAATTTTAGCCAAAATCGTGTACTAACCATCATGGTTTTTGGCTA
194 TTTC-GGGTCATTTTTTACAAAATTTTAGCCGAAATCGTGTACTAACCATCACGGTTTTTGGCTA
* * *
62778 AAAACGCGTGTCGAGGCCCCGGCTCAGTTTTGCATGATTTTTGGCGACGAGACTCCTTGAAATAT
258 AAAACGCGTTTCGAGGCCCCGACTCAGTTTTGCATGATTTTTGGCGCCGAGACTCCTTGAAATAT
62843 CTATATTC
323 CTATATTC
* * * * * * * *
62851 ATCTAATAAAATCTTAGTCACTTTGCATTTAAGGATTTGTATTTACGAGAATTTGAATTTTGTTT
1 ATCTAATAAAATCTCAGCCACATTGGATTTAAGGATTTGTTTTTACGAGCATCTGAATCTTGTTT
* * * *
62916 CGATTTAATCAGCAATTAATTTGGAAATAAAATAGGAAAAACGATATTAGAAGCGTGAAAAAACC
66 CGATTTAATTAGAAATTAA-TT-CAAA-AAAATAGGAAAAACGATATTAGAAGCGTG-AAAAGCC
* * * *
62981 CTTCAATCTTTTTTGGCGTTGAATTATATATTTTTATGAGTATTTTAGCGACAAATTGAGGAAAT
127 CTTCAATC-TTTTTGGCATTAAATTATATATTTTTATGAGTATTTTAGCCAAAAATTGAGGAAAT
* * *
63046 ATCTTTCGGATCAGTTTTTACTAAATTTTAGCCGAAATC--GT-C--A-CA--A---TTTTTGGC
191 ATCTTTCGGGTCATTTTTTACAAAATTTTAGCCGAAATCGTGTACTAACCATCACGGTTTTTGGC
* * * * ** * * *
63100 TAAAAAAGCGTTCCGAGGTCCTGTTTCAGTTTTGCATGATTTTTGGCGCCAAGACTCGTTGAGAT
256 TAAAAACGCGTTTCGAGGCCCCGACTCAGTTTTGCATGATTTTTGGCGCCGAGACTCCTTGAAAT
* *
63165 ATCCATATAC
321 ATCTATATTC
* * *
63175 TTCTAATCAAATCTCAGCCACATTGTATTTAA-GATTTTGTTTTTACGAGCATCTGAATCTTGTT
1 ATCTAATAAAATCTCAGCCACATTGGATTTAAGGA-TTTGTTTTTACGAGCATCTGAATCTTGTT
* * * * *
63239 TCGATTTAAATAGAAATAAATTCAAAAAAATATGAAAAACGATATTAAAAGCGTGAAAAGTCCTT
65 TCGATTTAATTAGAAATTAATTCAAAAAAATAGGAAAAACGATATTAGAAGCGTGAAAAGCCCTT
* * * * * * *
63304 TAATCTATTTGGTATTAAATTATATATATTTAATGAGTAGTTTATCCAAAAATTTG-GGAAACAT
130 CAATCTTTTTGGCATTAAATTATATAT-TTTTATGAGTATTTTAGCCAAAAA-TTGAGGAAATAT
* * *
63368 TTTTTGGGTCATTTTTTACAAAATTTTAGCCAAAATCGTG---------T-AC--TTTTTGGCTA
193 CTTTCGGGTCATTTTTTACAAAATTTTAGCCGAAATCGTGTACTAACCATCACGGTTTTTGGCTA
* * *
63421 AAAACGCGTTTCGAGGCCCCAACTAAGTTTTGCATGATTTTTTGGCGCCGAGACTCCTTAAAATA
258 AAAACGCGTTTCGAGGCCCCGACTCAGTTTTGCATGA-TTTTTGGCGCCGAGACTCCTTGAAATA
63486 TCTATATTC
322 TCTATATTC
* * * * ** * *
63495 ATCTAATAAAATCTTAGCCACTTTGCATTTGAGGATTTGTTTTTACGAATATCTAAATTTTGTTT
1 ATCTAATAAAATCTCAGCCACATTGGATTTAAGGATTTGTTTTTACGAGCATCTGAATCTTGTTT
* * * *
63560 CGATTTAATCAGAAATTATTTCAGAAAAAATATGAAAAACGATATTAGAAGCATGAAAAGCCCTT
66 CGATTTAATTAGAAATTAATTCA-AAAAAATAGGAAAAACGATATTAGAAGCGTGAAAAGCCCTT
* * * * * *
63625 CAATCTTTTTGGCATTAAATTATATATATTTAATGAGTATTTTATCCAAAGATTGGGGAAACATT
130 CAATCTTTTTGGCATTAAATTATATAT-TTTTATGAGTATTTTAGCCAAAAATTGAGGAAATATC
** * * *
63690 TTTACGGGTCATTTTTTACAAAATTTTAATCAAAATCGTGTACTAACAATCATGGTTTTTAGGCT
194 TTT-CGGGTCATTTTTTACAAAATTTTAGCCGAAATCGTGTACTAACCATCACGGTTTTT-GGCT
63755 AAAAACGCGTTTCGAGG
257 AAAAACGCGTTTCGAGG
Statistics
Matches: 5804, Mismatches: 907, Indels: 435
0.81 0.13 0.06
Matches are distributed among these distances:
312 5 0.00
314 17 0.00
315 2 0.00
316 38 0.01
317 1 0.00
318 12 0.00
319 119 0.02
320 242 0.04
321 161 0.03
322 43 0.01
323 12 0.00
324 146 0.03
325 8 0.00
326 12 0.00
327 2 0.00
328 19 0.00
329 128 0.02
330 344 0.06
331 1057 0.18
332 549 0.09
333 297 0.05
334 300 0.05
335 276 0.05
336 66 0.01
337 430 0.07
338 97 0.02
339 500 0.09
340 475 0.08
341 276 0.05
342 149 0.03
343 21 0.00
ACGTcount: A:0.33, C:0.15, G:0.16, T:0.37
Consensus pattern (330 bp):
ATCTAATAAAATCTCAGCCACATTGGATTTAAGGATTTGTTTTTACGAGCATCTGAATCTTGTTT
CGATTTAATTAGAAATTAATTCAAAAAAATAGGAAAAACGATATTAGAAGCGTGAAAAGCCCTTC
AATCTTTTTGGCATTAAATTATATATTTTTATGAGTATTTTAGCCAAAAATTGAGGAAATATCTT
TCGGGTCATTTTTTACAAAATTTTAGCCGAAATCGTGTACTAACCATCACGGTTTTTGGCTAAAA
ACGCGTTTCGAGGCCCCGACTCAGTTTTGCATGATTTTTGGCGCCGAGACTCCTTGAAATATCTA
TATTC
Done.