Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022471.1 Corchorus olitorius cultivar O-4 contig22504, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  30305

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3680--6395
331
8.3
328
78
7
2513
32
14
15
37
1.89
6653--6686
12
2.8
12
95
0
59
35
17
8
38
1.81
9245--9282
2
19.0
2
100
0
76
50
0
0
50
1.00
18235--18259
10
2.5
10
100
0
50
0
8
44
48
1.32
24263--24325
29
2.2
29
91
0
99
19
20
17
42
1.89
24425--24502
29
2.6
30
75
18
83
41
14
24
20
1.89

Tables:   1

The End!