Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022472.1 Corchorus olitorius cultivar O-4 contig22505, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  36032

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6368--6407
21
1.9
21
84
0
53
47
17
15
20
1.83
8948--9003
31
1.9
30
89
10
89
60
7
12
19
1.55
10360--10408
13
3.7
13
94
2
80
34
6
18
40
1.75
12091--12130
18
2.2
18
100
0
80
35
35
7
22
1.82
22510--22613
51
2.0
51
92
0
172
23
21
15
40
1.91
32470--32544
29
2.5
30
84
4
107
32
26
10
30
1.90
32469--32588
31
3.9
31
74
13
106
30
24
12
33
1.92
32837--32911
30
2.5
30
82
6
98
32
10
26
30
1.90
34723--34752
15
2.0
15
93
0
51
6
30
6
56
1.51
36004--36032
2
14.5
2
100
0
58
51
0
0
48
1.00

Tables:   1

The End!