Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022477.1 Corchorus olitorius cultivar O-4 contig22510, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  30796

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5931--6072
72
2.0
71
92
1
239
36
10
18
34
1.85
12841--12908
31
2.2
31
91
0
109
16
7
26
50
1.71
13087--13111
7
3.6
7
100
0
50
12
0
28
60
1.32
18192--18227
14
2.6
13
91
8
54
88
11
0
0
0.50
26625--26787
60
2.7
60
89
1
256
35
18
19
26
1.95
26685--26788
31
3.4
31
67
15
90
37
18
18
25
1.93
26827--26930
31
3.4
31
68
15
99
27
19
19
33
1.96
26830--26994
60
2.8
60
91
0
260
31
20
16
32
1.94
26889--26990
30
3.4
30
68
14
93
30
20
15
33
1.94

Tables:   1

The End!