Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022489.1 Corchorus olitorius cultivar O-4 contig22522, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  79695

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
676--706
13
2.5
13
94
5
55
41
9
0
48
1.36
2124--2173
26
1.9
26
91
0
82
38
14
2
46
1.56
3274--3308
4
8.5
4
93
6
61
0
22
0
77
0.78
3274--3308
17
2.1
17
94
5
63
0
22
0
77
0.78
7298--7326
14
2.1
14
100
0
58
20
0
13
65
1.26
9248--9280
16
2.1
16
88
11
50
33
9
6
51
1.58
10780--10810
1
31.0
1
100
0
62
100
0
0
0
0.00
32165--32222
29
1.9
31
83
13
77
55
5
1
37
1.33
42740--42793
28
1.9
28
100
0
108
33
0
24
42
1.55
43700--43757
19
2.9
19
84
5
71
27
22
13
36
1.92
46115--46144
15
1.9
15
93
6
51
76
6
10
6
1.15
78518--78701
59
3.0
59
84
12
273
30
23
9
36
1.86
78497--78679
59
3.0
63
85
12
288
31
22
8
37
1.84

Tables:   1

The End!