Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022490.1 Corchorus olitorius cultivar O-4 contig22523, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  92652

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2246--2273
11
2.5
11
100
0
56
0
7
0
92
0.37
4627--4668
21
1.9
23
85
9
61
61
11
21
4
1.48
20182--20254
36
2.0
36
94
0
128
41
21
10
26
1.86
30233--30281
21
2.3
22
75
10
57
32
20
2
44
1.63
31696--31979
124
2.2
129
82
12
303
50
2
10
36
1.52
32343--32368
1
26.0
1
100
0
52
100
0
0
0
0.00
56028--56062
11
3.2
11
83
0
52
2
2
14
80
0.95
68270--68352
41
2.0
41
97
0
157
45
28
15
9
1.78
71592--71648
20
2.9
20
97
2
107
56
5
15
22
1.60
72791--72889
43
2.3
44
87
1
146
21
29
22
27
1.99
76031--76089
19
3.1
19
79
13
59
57
0
6
35
1.25
87211--87235
7
3.6
7
100
0
50
88
0
0
12
0.53
90430--90454
12
2.1
12
100
0
50
52
32
8
8
1.60
92113--92200
3
29.3
3
100
0
176
67
0
0
32
0.91

Tables:   1

The End!