Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022499.1 Corchorus olitorius cultivar O-4 contig22532, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  44184

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
621--670
25
2.0
25
100
0
100
32
16
12
40
1.84
2126--2234
28
3.9
28
98
0
209
28
19
32
20
1.97
21475--21613
73
1.9
73
95
0
251
36
14
17
30
1.90
28451--28494
23
1.9
23
100
0
88
36
13
22
27
1.92
38316--38365
22
2.3
22
100
0
100
20
28
28
24
1.99
42280--42442
60
2.7
60
89
1
256
35
17
19
27
1.94
42481--42645
60
2.8
60
86
3
235
27
19
18
35
1.95
42482--42649
31
5.6
30
65
13
94
27
19
18
34
1.95
42657--42700
23
1.9
23
95
0
79
27
13
11
47
1.77

Tables:   1

The End!