Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022510.1 Corchorus olitorius cultivar O-4 contig22543, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28567

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
272--470
98
2.0
98
99
0
389
40
14
9
36
1.77
2924--2993
36
1.9
36
91
0
113
21
10
8
60
1.55
3504--3911
203
2.0
200
95
1
726
43
9
10
36
1.71
19871--20038
59
2.8
59
84
6
171
38
14
16
30
1.89
19903--20044
59
2.4
60
87
5
207
38
15
16
29
1.90
22479--22526
17
2.8
17
87
0
60
33
18
22
25
1.97
23457--23498
14
3.1
14
75
6
50
66
4
11
16
1.40
24794--24823
15
1.9
16
93
6
53
83
0
16
0
0.65
25779--25805
6
4.5
6
100
0
54
0
0
48
51
1.00
25894--25937
16
2.8
16
93
3
72
13
13
2
70
1.26

Tables:   1

The End!