Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022516.1 Corchorus olitorius cultivar O-4 contig22549, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3997

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1919--1959
19
2.2
19
100
0
82
58
4
0
36
1.20
1962--2004
18
2.5
17
81
11
52
46
0
4
48
1.22
3292--3326
18
1.9
18
94
0
61
51
11
8
28
1.67
3369--3402
12
2.8
12
87
12
52
50
0
0
50
1.00
3454--3499
18
2.4
18
85
7
56
47
0
2
50
1.13
3419--3494
19
4.0
19
70
19
61
43
0
3
52
1.19
3687--3750
21
3.2
20
82
8
76
35
12
20
31
1.90
3693--3750
19
2.9
19
84
5
71
36
12
20
31
1.89

Tables:   1

The End!