Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022519.1 Corchorus olitorius cultivar O-4 contig22552, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  47241

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
376--404
10
2.7
11
94
5
51
10
62
27
0
1.28
1004--1167
82
2.0
82
96
0
301
40
15
15
28
1.88
15807--15903
45
2.2
45
84
1
124
35
5
19
40
1.74
16125--16152
14
2.0
14
100
0
56
35
21
14
28
1.92
18278--18544
136
2.0
132
85
5
358
39
9
2
48
1.49
24837--24921
42
2.0
42
100
0
170
45
4
16
32
1.68
24895--24984
44
2.0
44
97
0
171
47
2
15
34
1.58
29245--29284
14
2.9
13
85
10
53
7
12
0
80
0.91
29256--29284
14
2.1
14
100
0
58
6
6
0
86
0.72

Tables:   1

The End!