Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022532.1 Corchorus olitorius cultivar O-4 contig22565, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  56992

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3219--4365
442
2.6
439
82
4
1308
31
14
12
42
1.82
6595--6807
117
1.8
117
89
0
336
50
1
12
35
1.51
24813--24873
30
2.0
30
100
0
122
36
21
9
32
1.86
24890--24923
14
2.4
14
90
0
50
58
0
14
26
1.36
24898--24925
14
2.0
14
100
0
56
64
0
7
28
1.20
49163--49195
3
11.0
3
100
0
66
0
33
0
66
0.92
55283--55417
45
3.0
45
90
0
216
27
33
13
25
1.93

Tables:   1

The End!