Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022536.1 Corchorus olitorius cultivar O-4 contig22569, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  43677

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7917--7945
6
4.8
6
100
0
58
31
34
0
34
1.58
10592--10647
17
2.9
19
75
19
62
50
0
0
50
1.00
10794--10855
22
2.8
22
97
2
115
50
8
14
27
1.71
11172--11262
47
1.9
45
87
12
130
31
7
14
46
1.73
11172--11262
48
1.9
47
95
4
166
31
7
14
46
1.73
19460--19489
15
2.0
15
93
0
51
6
16
0
76
0.99
42570--42616
21
2.2
21
96
0
85
38
10
14
36
1.81
43476--43506
15
2.1
15
100
0
62
61
12
6
19
1.53
43530--43567
14
2.7
14
91
0
67
71
0
7
21
1.11

Tables:   1

The End!