Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022538.1 Corchorus olitorius cultivar O-4 contig22571, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12576

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
20--115
33
2.9
32
87
1
129
36
21
14
27
1.93
30--115
33
2.6
33
90
0
145
39
23
12
24
1.89
101--250
63
2.3
65
85
3
187
38
16
11
34
1.84
287--333
24
2.0
24
91
0
76
27
21
23
27
1.99
355--416
22
2.8
22
78
9
72
46
20
14
17
1.83
2261--2301
19
2.3
17
83
8
55
0
21
9
68
1.18
11501--11561
29
2.1
30
87
3
88
50
3
3
42
1.34

Tables:   1

The End!