Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01022539.1 Corchorus olitorius cultivar O-4 contig22572, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13718

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
333--417
42
2.0
42
86
4
118
36
3
18
41
1.68
905--1160
124
2.0
126
89
2
399
24
17
24
33
1.97
1456--1601
40
3.7
38
72
13
107
23
26
17
33
1.96
1523--1871
133
2.6
131
88
2
484
26
21
14
36
1.93
4543--4619
40
1.9
40
86
5
111
20
28
20
29
1.98
4545--4640
40
2.4
40
77
6
104
26
27
16
30
1.97
4603--4824
83
2.7
81
84
6
270
27
23
13
34
1.93
4606--4824
40
5.3
40
74
8
199
28
23
14
34
1.93
4811--4931
51
2.4
51
97
1
226
27
23
14
33
1.94

Tables:   1

The End!